Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3060 |
Symbol | |
ID | 6207070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 3916164 |
End bp | 3916613 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641692724 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001819940 |
Protein GI | 182414874 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00975792 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGCGA TCGAAGGCTA CCGACTGATC ACGCCGAGCG ACCTGAGCTG GCGGCCGTCG AATCTGATGT GTATCCCGAA TGCGGATTAC CTCGAGCGCA CAGGCAGCGA ACTGTTGGGC GCGCGGCTGT GGCGACTGCC GCCGAAGAGT GCGAACACGC TGCATCGGCA CGTGATCGCG GAGGAGTTTT ATTTCGTGCT GGAGGGAACG GGCCGGATCC GGGTGGGTGA GGAGACACTG ACCGTGCCGC GTTATGGCGG CGTGTTGGTG GGGCCGGCGA TGCTGCGGCA GATCTTCAAC GATTCAGATA CGGAAGTGCT CTGGTTGATC GTCGGCGCGC CGGACAAGGA GTTCGAATCC GGCAAGTTTG ACCTGAAGCA GTTCTATCCG GTCGAGCCGA CGCAGCTTCC GTCCGAGTTG AAGGGAGTCG CCTGGCCGCC GAAGGGCTGA
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Protein sequence | MKAIEGYRLI TPSDLSWRPS NLMCIPNADY LERTGSELLG ARLWRLPPKS ANTLHRHVIA EEFYFVLEGT GRIRVGEETL TVPRYGGVLV GPAMLRQIFN DSDTEVLWLI VGAPDKEFES GKFDLKQFYP VEPTQLPSEL KGVAWPPKG
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