Gene Oter_2931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2931 
Symbol 
ID6207562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp3753542 
End bp3755842 
Gene Length2301 bp 
Protein Length766 aa 
Translation table11 
GC content67% 
IMG OID641692596 
Producthypothetical protein 
Protein accessionYP_001819812 
Protein GI182414746 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0187375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCTT TCTTCCGCGC GCCCCGCGTC CTGATCTTTC TGGTGTCGTT TTCGTTGATT 
TCGCTCGAGA TCGTCTGGAC GCGACTCTTG TCGGCGGAGT TTTTCTACAC CTTCGCTTTC
CTGATCCTCT CGCTGGCAGT GATGGGGCTC GGACTCGGTG GACTGGCGCT GCGGTTGTTC
CCGCGGCTGG CGGGGCTGCG CTTGCTCGCG CCGTTGCTCT TGGCCACCGC AGCGCTCGCC
CTCGGCGGGC CGCTGGCGGT GCTGCACCTT GGTTTGGACT TCGTGCAGGT CGTCTCGAGC
CCCGCGATGC TCGGGCGGCT CGCGTTGGCG GTGTTGATCC TGTGTTCGAG CTTTTTCACC
GGCGGCATGG TCGTGGCGCT GATCTTTCGT TGGGAGCACG CGGACATGCC CAAACTCTAC
CGCGCCGATC TCGTCGGCGC GGCGCTGGGC GTGGTTGCCG CCATCGCTCT GATGAACAGC
GTGGGCACGC CCGCGACGGC GCTCTTGCTG CCGCTGCCGC TGCTGATGGC GGCGGCACTC
CGGCTGACCG GCTGGCGACG TTATGCCTCG CTGCTGCTGG TGGTCATTCC GTTCGGGCTG
CTGCCTTGGC GCGAGTCACT GGTGGCGAAA CCACGCCAGG AGCGACTGCC CGTCGTGCAG
CGACATTGGG ATGCGATGGC GCTGGTGAAG ATCCAGCAAG GCGAGGGCTA CAAAAATCTC
GGCATCGACA ACGCCGCCAA CACGCCCGTG AACGAGTTCG ACGGCAACTG GGCGGACCTG
CGGGCCCAAC CCTCGCCGTT CTTCCTCGAT CCGCAGCCGC TGATGGAGTC GATGACCGGG
TGCCGGTTCC TCTCGATCGG CGCCGGCGGA GGCGGCGACG TGCTGCTGGC GCTGAAGAAC
GGCGCCGCCG AGGTGCACGC CGTCGAGGTG AATTCGTTCA TCAACGGGCT GCTCGTCGAG
GGCGGCGCGC TGTCCGCCTA CTCCGGCCGG CTCTATTCGG ACCCACGCGT GCGGGTCGTG
ACCGAGGATG CCCGCAGTTA CGTGCGGCGG CATCGCGAGC AGTTCGATGT GATCTACTCG
CTTAGCTCAA ACACGTTTGC CGCGCTGGCC AGCGGCGCAT TTGCGCTGGC GGAAAACTAC
CTCTTCACCA CGGAGGCGTT TCGCGACGCC TACCGCGCGC TGCGCCCGGG CGGCTTCCTG
ATCGTCGAGC ATCAATTCTA CGGTCCCCGG CTCGTCAGTG AGGCCCTCGC CGGGCTGCGG
CTCTGCGGGA TCAGCGAGCC GGAGCGGCAT CTCGCGGTCT ATGCGCTGCC GAAGCTACGC
CGGCAGGTGC TGCTGATCGG CCGGGCGCCG CTCAGCGAGG CGCAGATCGA GCACGCGTTC
CTCGCGCTCG CGGGGAAGGA TCCGATGCTG ATGCAGCGCG TGTATCCGCA GCCGGCCCCC
GGGGCCAATC CGCTCATCGA CCGGATCGTG CGCGAAGGCT GGCGGCGTGT GCAGCCCGAC
TCGGCGACGG ATCTCTCGCC GGCGGACGAC AACCGGCCGT TCACCGCGCA GCAGGGGCTG
ATGAAAAACG TCAGCGTGGA GAAGCTGAAA ACGCCGGATG CGATGGAATA CCGCGGGTTT
CCCATCTCGA AACTGCTGAT CGTAGTGGTG GTGGCGCTCG TGGCGCTGCT GGCGCTGCCG
CTGAATCTGC TGCCATTTCT CCGGCCGGGA CCACGGCTGC GCGGAGCGGC GTGGCTTTAT
TTCTTCAGCA TCGGCGCGGG TTTCATGGTC ATCGAGTTGG TGCTGCTGCA GCAGTTCACG
CTGATGATCG GTCCCTCCGC CTACACGCTC GCGGTGCTCC TGTTCGTGTT GCTGCTGTGC
TCCGGTCTCG GCAGCCGTTA CTCGCTCGCG GCGCCCGATT TTCTGCCGTT CGTGGGCGTC
GTCGTCTGGG TGCTGCTCAA CGTATTCTTC TTCACCGCGT GCGCGGAGGC TTGCGCGCTG
TACCCGATGT GGGGCCGGAT GGCGGCGTCC GCGGCGCTGA TCGGGCCGCT GGGCTTTTTC
ATGGGCATGC CTTTTGCGAA GGGCTCGACG CGGGTGGGGG AGCTGGTGGA TTGGGGATTT
GCGGTGAACG GGGCGGCCGC GGTGCTTGGC TCCGGCGCGG TCCTGCTGCT CGCGTTCAGC
TTCGGTTTCC GGATCGCGCT GCTCGCCGGC GCCGCCCTCT ATGTGGCGGC AGGCCTGTTG
CTGGCGCGAC GCCACGCTTG GACGCCGGTG GAGCGAGGAT CGCGGGAATC GGAACACGCC
GTCGCGGTCG GTCAATTGTA G
 
Protein sequence
MPAFFRAPRV LIFLVSFSLI SLEIVWTRLL SAEFFYTFAF LILSLAVMGL GLGGLALRLF 
PRLAGLRLLA PLLLATAALA LGGPLAVLHL GLDFVQVVSS PAMLGRLALA VLILCSSFFT
GGMVVALIFR WEHADMPKLY RADLVGAALG VVAAIALMNS VGTPATALLL PLPLLMAAAL
RLTGWRRYAS LLLVVIPFGL LPWRESLVAK PRQERLPVVQ RHWDAMALVK IQQGEGYKNL
GIDNAANTPV NEFDGNWADL RAQPSPFFLD PQPLMESMTG CRFLSIGAGG GGDVLLALKN
GAAEVHAVEV NSFINGLLVE GGALSAYSGR LYSDPRVRVV TEDARSYVRR HREQFDVIYS
LSSNTFAALA SGAFALAENY LFTTEAFRDA YRALRPGGFL IVEHQFYGPR LVSEALAGLR
LCGISEPERH LAVYALPKLR RQVLLIGRAP LSEAQIEHAF LALAGKDPML MQRVYPQPAP
GANPLIDRIV REGWRRVQPD SATDLSPADD NRPFTAQQGL MKNVSVEKLK TPDAMEYRGF
PISKLLIVVV VALVALLALP LNLLPFLRPG PRLRGAAWLY FFSIGAGFMV IELVLLQQFT
LMIGPSAYTL AVLLFVLLLC SGLGSRYSLA APDFLPFVGV VVWVLLNVFF FTACAEACAL
YPMWGRMAAS AALIGPLGFF MGMPFAKGST RVGELVDWGF AVNGAAAVLG SGAVLLLAFS
FGFRIALLAG AALYVAAGLL LARRHAWTPV ERGSRESEHA VAVGQL