Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2931 |
Symbol | |
ID | 6207562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 3753542 |
End bp | 3755842 |
Gene Length | 2301 bp |
Protein Length | 766 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641692596 |
Product | hypothetical protein |
Protein accession | YP_001819812 |
Protein GI | 182414746 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0187375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCTT TCTTCCGCGC GCCCCGCGTC CTGATCTTTC TGGTGTCGTT TTCGTTGATT TCGCTCGAGA TCGTCTGGAC GCGACTCTTG TCGGCGGAGT TTTTCTACAC CTTCGCTTTC CTGATCCTCT CGCTGGCAGT GATGGGGCTC GGACTCGGTG GACTGGCGCT GCGGTTGTTC CCGCGGCTGG CGGGGCTGCG CTTGCTCGCG CCGTTGCTCT TGGCCACCGC AGCGCTCGCC CTCGGCGGGC CGCTGGCGGT GCTGCACCTT GGTTTGGACT TCGTGCAGGT CGTCTCGAGC CCCGCGATGC TCGGGCGGCT CGCGTTGGCG GTGTTGATCC TGTGTTCGAG CTTTTTCACC GGCGGCATGG TCGTGGCGCT GATCTTTCGT TGGGAGCACG CGGACATGCC CAAACTCTAC CGCGCCGATC TCGTCGGCGC GGCGCTGGGC GTGGTTGCCG CCATCGCTCT GATGAACAGC GTGGGCACGC CCGCGACGGC GCTCTTGCTG CCGCTGCCGC TGCTGATGGC GGCGGCACTC CGGCTGACCG GCTGGCGACG TTATGCCTCG CTGCTGCTGG TGGTCATTCC GTTCGGGCTG CTGCCTTGGC GCGAGTCACT GGTGGCGAAA CCACGCCAGG AGCGACTGCC CGTCGTGCAG CGACATTGGG ATGCGATGGC GCTGGTGAAG ATCCAGCAAG GCGAGGGCTA CAAAAATCTC GGCATCGACA ACGCCGCCAA CACGCCCGTG AACGAGTTCG ACGGCAACTG GGCGGACCTG CGGGCCCAAC CCTCGCCGTT CTTCCTCGAT CCGCAGCCGC TGATGGAGTC GATGACCGGG TGCCGGTTCC TCTCGATCGG CGCCGGCGGA GGCGGCGACG TGCTGCTGGC GCTGAAGAAC GGCGCCGCCG AGGTGCACGC CGTCGAGGTG AATTCGTTCA TCAACGGGCT GCTCGTCGAG GGCGGCGCGC TGTCCGCCTA CTCCGGCCGG CTCTATTCGG ACCCACGCGT GCGGGTCGTG ACCGAGGATG CCCGCAGTTA CGTGCGGCGG CATCGCGAGC AGTTCGATGT GATCTACTCG CTTAGCTCAA ACACGTTTGC CGCGCTGGCC AGCGGCGCAT TTGCGCTGGC GGAAAACTAC CTCTTCACCA CGGAGGCGTT TCGCGACGCC TACCGCGCGC TGCGCCCGGG CGGCTTCCTG ATCGTCGAGC ATCAATTCTA CGGTCCCCGG CTCGTCAGTG AGGCCCTCGC CGGGCTGCGG CTCTGCGGGA TCAGCGAGCC GGAGCGGCAT CTCGCGGTCT ATGCGCTGCC GAAGCTACGC CGGCAGGTGC TGCTGATCGG CCGGGCGCCG CTCAGCGAGG CGCAGATCGA GCACGCGTTC CTCGCGCTCG CGGGGAAGGA TCCGATGCTG ATGCAGCGCG TGTATCCGCA GCCGGCCCCC GGGGCCAATC CGCTCATCGA CCGGATCGTG CGCGAAGGCT GGCGGCGTGT GCAGCCCGAC TCGGCGACGG ATCTCTCGCC GGCGGACGAC AACCGGCCGT TCACCGCGCA GCAGGGGCTG ATGAAAAACG TCAGCGTGGA GAAGCTGAAA ACGCCGGATG CGATGGAATA CCGCGGGTTT CCCATCTCGA AACTGCTGAT CGTAGTGGTG GTGGCGCTCG TGGCGCTGCT GGCGCTGCCG CTGAATCTGC TGCCATTTCT CCGGCCGGGA CCACGGCTGC GCGGAGCGGC GTGGCTTTAT TTCTTCAGCA TCGGCGCGGG TTTCATGGTC ATCGAGTTGG TGCTGCTGCA GCAGTTCACG CTGATGATCG GTCCCTCCGC CTACACGCTC GCGGTGCTCC TGTTCGTGTT GCTGCTGTGC TCCGGTCTCG GCAGCCGTTA CTCGCTCGCG GCGCCCGATT TTCTGCCGTT CGTGGGCGTC GTCGTCTGGG TGCTGCTCAA CGTATTCTTC TTCACCGCGT GCGCGGAGGC TTGCGCGCTG TACCCGATGT GGGGCCGGAT GGCGGCGTCC GCGGCGCTGA TCGGGCCGCT GGGCTTTTTC ATGGGCATGC CTTTTGCGAA GGGCTCGACG CGGGTGGGGG AGCTGGTGGA TTGGGGATTT GCGGTGAACG GGGCGGCCGC GGTGCTTGGC TCCGGCGCGG TCCTGCTGCT CGCGTTCAGC TTCGGTTTCC GGATCGCGCT GCTCGCCGGC GCCGCCCTCT ATGTGGCGGC AGGCCTGTTG CTGGCGCGAC GCCACGCTTG GACGCCGGTG GAGCGAGGAT CGCGGGAATC GGAACACGCC GTCGCGGTCG GTCAATTGTA G
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Protein sequence | MPAFFRAPRV LIFLVSFSLI SLEIVWTRLL SAEFFYTFAF LILSLAVMGL GLGGLALRLF PRLAGLRLLA PLLLATAALA LGGPLAVLHL GLDFVQVVSS PAMLGRLALA VLILCSSFFT GGMVVALIFR WEHADMPKLY RADLVGAALG VVAAIALMNS VGTPATALLL PLPLLMAAAL RLTGWRRYAS LLLVVIPFGL LPWRESLVAK PRQERLPVVQ RHWDAMALVK IQQGEGYKNL GIDNAANTPV NEFDGNWADL RAQPSPFFLD PQPLMESMTG CRFLSIGAGG GGDVLLALKN GAAEVHAVEV NSFINGLLVE GGALSAYSGR LYSDPRVRVV TEDARSYVRR HREQFDVIYS LSSNTFAALA SGAFALAENY LFTTEAFRDA YRALRPGGFL IVEHQFYGPR LVSEALAGLR LCGISEPERH LAVYALPKLR RQVLLIGRAP LSEAQIEHAF LALAGKDPML MQRVYPQPAP GANPLIDRIV REGWRRVQPD SATDLSPADD NRPFTAQQGL MKNVSVEKLK TPDAMEYRGF PISKLLIVVV VALVALLALP LNLLPFLRPG PRLRGAAWLY FFSIGAGFMV IELVLLQQFT LMIGPSAYTL AVLLFVLLLC SGLGSRYSLA APDFLPFVGV VVWVLLNVFF FTACAEACAL YPMWGRMAAS AALIGPLGFF MGMPFAKGST RVGELVDWGF AVNGAAAVLG SGAVLLLAFS FGFRIALLAG AALYVAAGLL LARRHAWTPV ERGSRESEHA VAVGQL
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