Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2878 |
Symbol | |
ID | 6206795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 3676758 |
End bp | 3678035 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641692543 |
Product | cystathionine gamma-synthase |
Protein accession | YP_001819759 |
Protein GI | 182414693 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACC ATCACGACAG CTGGTTGGAG CAAGCGGCCG GGAATCCGGC GAGCGACCCG CGCCACGAGC CCTCCCCACC GCGGCGCCAA AGGAACGCGT CCTATCAGCT GGCCACCCGC TGCGCACGCG CGGGAAGCGG TCCGCGCGAG GCGGGCCGCA ACGCGTCGGT GCAACCGGCG ATTCACCAGA GCGCCATTTT CGACTTGGGT GCACCGGAGG ATGCCGAGGC GATTTTTTCC GGAGCGCGGA AAGGCTATGC GTATTCGCGT TTCGGCAACC CGACCGTCGA TGCGCTCGCG CGGAGCCTGG CTGACCTCGA AGGTGGCCAC GGAGCCGTCG TCACCAGCTC CGGAAACGCG GCGGTCCTCT GCGCCGTGAC GGCGGCGTTG CAGGGACGGC AAGGTCCGCT GGTGACGCAT CCGGACATTT ACGGCGGCAG TTTCGAACTG CTGCGCATCC TGGCAGACGT CTATCGAGTG CCGGTGGAGT TCGTCGATCC GGCGGACGAG GACCAGTGGT TTCGTGCTTT GGAGCGGGCT GGTGCCGTCC TTGTCGAGAC GCCGTCGAAT CCGCTGCTGC GGCTCATTGA CCTCGCGGCG ATCGTCCAGC ATGCGAAAGT TGGCGGAGCC GAGGTGATCG TGGACAACAC CGTGGCAACG CCGTTCAACC AACGTCCGTT TCAATTCGGC GCCGACTGGG TGGTTCATTC CACCACCAAG TATTTGAACG GCCATGGCGA CCTGATCGGC GGGGGCGTGA TCCGCCGCGA GCCGTTCACC GCCAGCCACC GCAGCATTCA CAAGAATCTC GGCGGGACGG TGAACGCGTT CGACGCCTGG CTGGTGATGC GCGGATTGCG GACCTTCACG CTCCGGATGG AAGCACACAA CCGCAGCGGC GAGATCGTGG CGCGTTGGCT GGAGCAGCGG CCGGAAATTT CGCGCGTGTA CCATCCCTCG CTCGACTCGC ATCCGCAGAG GGAACTGTTC GGGCGGCAGA TGAGCCACGG CGGCGGGCTG CTCTCCTTCG AACTTCGCGG TGGCGAGCCG GCGGCCATCC GCTTCCTCAG CCGAATGCAA CTCATCGTGC ATGCGGTGAG CCTCGGGGGA CCGGAGACGC TGGCGACGAT GCCGGCGCGG TCCAGTCATC GCGGCATGGC CCCGGACGCC CGACAGCGGG CTGGCGTGCG AGATGGCTTG GTCCGGCTTT CGGTCGGGCT CGAACACGTC GACGACATCC TCGCGGACTT GGACCACGCG CTGCGAGCCG AGACGTGA
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Protein sequence | MMNHHDSWLE QAAGNPASDP RHEPSPPRRQ RNASYQLATR CARAGSGPRE AGRNASVQPA IHQSAIFDLG APEDAEAIFS GARKGYAYSR FGNPTVDALA RSLADLEGGH GAVVTSSGNA AVLCAVTAAL QGRQGPLVTH PDIYGGSFEL LRILADVYRV PVEFVDPADE DQWFRALERA GAVLVETPSN PLLRLIDLAA IVQHAKVGGA EVIVDNTVAT PFNQRPFQFG ADWVVHSTTK YLNGHGDLIG GGVIRREPFT ASHRSIHKNL GGTVNAFDAW LVMRGLRTFT LRMEAHNRSG EIVARWLEQR PEISRVYHPS LDSHPQRELF GRQMSHGGGL LSFELRGGEP AAIRFLSRMQ LIVHAVSLGG PETLATMPAR SSHRGMAPDA RQRAGVRDGL VRLSVGLEHV DDILADLDHA LRAET
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