Gene Oter_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2878 
Symbol 
ID6206795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp3676758 
End bp3678035 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content66% 
IMG OID641692543 
Productcystathionine gamma-synthase 
Protein accessionYP_001819759 
Protein GI182414693 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACC ATCACGACAG CTGGTTGGAG CAAGCGGCCG GGAATCCGGC GAGCGACCCG 
CGCCACGAGC CCTCCCCACC GCGGCGCCAA AGGAACGCGT CCTATCAGCT GGCCACCCGC
TGCGCACGCG CGGGAAGCGG TCCGCGCGAG GCGGGCCGCA ACGCGTCGGT GCAACCGGCG
ATTCACCAGA GCGCCATTTT CGACTTGGGT GCACCGGAGG ATGCCGAGGC GATTTTTTCC
GGAGCGCGGA AAGGCTATGC GTATTCGCGT TTCGGCAACC CGACCGTCGA TGCGCTCGCG
CGGAGCCTGG CTGACCTCGA AGGTGGCCAC GGAGCCGTCG TCACCAGCTC CGGAAACGCG
GCGGTCCTCT GCGCCGTGAC GGCGGCGTTG CAGGGACGGC AAGGTCCGCT GGTGACGCAT
CCGGACATTT ACGGCGGCAG TTTCGAACTG CTGCGCATCC TGGCAGACGT CTATCGAGTG
CCGGTGGAGT TCGTCGATCC GGCGGACGAG GACCAGTGGT TTCGTGCTTT GGAGCGGGCT
GGTGCCGTCC TTGTCGAGAC GCCGTCGAAT CCGCTGCTGC GGCTCATTGA CCTCGCGGCG
ATCGTCCAGC ATGCGAAAGT TGGCGGAGCC GAGGTGATCG TGGACAACAC CGTGGCAACG
CCGTTCAACC AACGTCCGTT TCAATTCGGC GCCGACTGGG TGGTTCATTC CACCACCAAG
TATTTGAACG GCCATGGCGA CCTGATCGGC GGGGGCGTGA TCCGCCGCGA GCCGTTCACC
GCCAGCCACC GCAGCATTCA CAAGAATCTC GGCGGGACGG TGAACGCGTT CGACGCCTGG
CTGGTGATGC GCGGATTGCG GACCTTCACG CTCCGGATGG AAGCACACAA CCGCAGCGGC
GAGATCGTGG CGCGTTGGCT GGAGCAGCGG CCGGAAATTT CGCGCGTGTA CCATCCCTCG
CTCGACTCGC ATCCGCAGAG GGAACTGTTC GGGCGGCAGA TGAGCCACGG CGGCGGGCTG
CTCTCCTTCG AACTTCGCGG TGGCGAGCCG GCGGCCATCC GCTTCCTCAG CCGAATGCAA
CTCATCGTGC ATGCGGTGAG CCTCGGGGGA CCGGAGACGC TGGCGACGAT GCCGGCGCGG
TCCAGTCATC GCGGCATGGC CCCGGACGCC CGACAGCGGG CTGGCGTGCG AGATGGCTTG
GTCCGGCTTT CGGTCGGGCT CGAACACGTC GACGACATCC TCGCGGACTT GGACCACGCG
CTGCGAGCCG AGACGTGA
 
Protein sequence
MMNHHDSWLE QAAGNPASDP RHEPSPPRRQ RNASYQLATR CARAGSGPRE AGRNASVQPA 
IHQSAIFDLG APEDAEAIFS GARKGYAYSR FGNPTVDALA RSLADLEGGH GAVVTSSGNA
AVLCAVTAAL QGRQGPLVTH PDIYGGSFEL LRILADVYRV PVEFVDPADE DQWFRALERA
GAVLVETPSN PLLRLIDLAA IVQHAKVGGA EVIVDNTVAT PFNQRPFQFG ADWVVHSTTK
YLNGHGDLIG GGVIRREPFT ASHRSIHKNL GGTVNAFDAW LVMRGLRTFT LRMEAHNRSG
EIVARWLEQR PEISRVYHPS LDSHPQRELF GRQMSHGGGL LSFELRGGEP AAIRFLSRMQ
LIVHAVSLGG PETLATMPAR SSHRGMAPDA RQRAGVRDGL VRLSVGLEHV DDILADLDHA
LRAET