| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2605 |
|---|
| Symbol | |
|---|
| ID | 6207616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3343870 |
|---|
| End bp | 3348231 |
|---|
| Gene Length | 4362 bp |
|---|
| Protein Length | 1453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641692265 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001819486 |
|---|
| Protein GI | 182414420 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3292] Predicted periplasmic ligand-binding sensor domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGAC GAATCCACTG CTGGCCACTT GCGTTCGCCC TTGGCCTGCT GCTGTCGCCC
AGCGCCCACG CGCTCGACCC GGCAAAATCC GTCTACCAGT TCAACGTCCA GAACTGGACC
CGACATGACG GGCTGCAGGG CAACAAGGTC AATGCGATCA CCCAAACGAG CGACGGCTAT
ATCTGGATCG GCACGCAGAA CGGCCTGCTG CGGTTTGACG GATCCGAGTT CACGGCCCTG
CCTGCAAAGC TGCCGGAGGC GAACAGCCAG GAGATCGTCA GCATGGCGGC CGCGGCCAAC
GGCGGATTAT GGTTCGCCCT CAACGCGGGC GGATTCGGTC ATTGGGATGG CCGGGATCTT
TCGCGGATCA GTGACCAGCG TTGGAACGAT GCCAACACGA ACGGCCACAC TCTCCTCGGA
GCCCGCGACG GGACCGTGTG GACGGGGACG GACCGGTCGA TCGGTCGCTG GATGCCGGAG
CAGCCGGCCA GTTCGATCTT CGACGAGTCC ATCACGCGCG TCGTATGTCT GCACGAGGAT
GCGCAAAACC GCATTTGGAT TGGAACGCAG GAGACGGGAG TTTTTTCCTG GTCGGACGGT
CGATTCACGC GGTTTCGGGA CGCCGAACTG ACCAAGCACG TGATCAAGGG TCTTGCCACC
GCGCCCAATG GCGAGCTCTG GGTAGCGCTC GAACACGAGC TGCGGCGCTA CGACGCAAAT
GGTGAGCCGA TGGCGCTGCC GGCTTTCTCA CATCCGATCA CCGCGCTGCT GGTTGATCGC
CATGGTATCA CCTGGATTGG CAGCGCCTCG GGCCTTGTTC GCTATCAGGA TGGGCAGTTC
AGCACCCTGA AGAAAATCGA CGGGCTCGCT AACGAATACG TCACCGCTTT GTTCGAGGAT
CGGGAGGGCA GTCTGTGGGT CGGAACGCAG AGCGGATTGA GCCAGGTGTC CGATCTGAAG
TTTCCGATCT TTTCGGAGAA AGAAGGGCTG CACCACGGTG GCAGTCTCAC GGTCACAGCC
GCGGCCGCGG GCGGGATCTG GATCACCACG ACCCACGGAT TTGCGCATTT CGACGGCCGG
AGATTCACCA ATTACACCGA CCCGGCCCTT TTATCCAACC CCTACGTCAA ACTTGGCCTG
GAAGCCCGCA ACGGTGACTT CTACTGGGTC GACGGCGACA AGAGTATAAG TGTGCTTTCC
GGCGGTCGCC TCGCCGCGCG TTATTCGAGC AGCGAGTGGA CCGAAGCGCT CACCGAAGAC
GACGAGGGCG TGCTGGCCGG GGTCGGGCCG AATCTGATGC GACTCAAAAA TGGTCGCTTG
GAGCCTTACT CCTTCAAAGG CGACCGTAGA CCGGAGTTCC AGTGGTTCGA CAATCTCGCC
ACCGCGCGCG ATGGCGCCAT CTGGGTGGCC TGCTACAACG GGCTGTTCCG GGTGAAGAAC
GGCGAGTTCC GCCAATGGTC CACGGTGGAC GGACTTTCGG GCAATCGCGT CCATTTCGTC
TTCGAGGACG GCGACGGCTG CATCTGGGCG GGCCTGTCCA CGGGGATGGC CCGGATCCGC
GGCAATGATC TCCGCAACAT CACCGAGGCG AACGGGCTGT TCGACAACCG CACCTACGCG
ATCGTCCCCG ATGATACCGG CTATTTCTGG GTGAATTCCG GCCGCGGCAT CTACCGGGTG
AGTCGCCAGG CCCTTCACGA TTTCGCCGAC GGGCGCAGCA GTCGGATTCA GTGCGAGCCG
TTTGACGGTG AGGAATCGGT GAAATTCACG GATCGCGTCG ATCAGGAATA CTCCGGCTGC
CGCAGCGCCG ATGGCCGGAT ATGGTTCCCG AATCCGTGGG GCGTGGTGAT GATCGATCCC
GCGGACTACG TCGTGAATCG CGTGCCCCCG CCGGTGCATA TCCAGCGCGT CGAGGTGAAC
GGCACCGCCG TCGCCCAAGT CCGTGACCAG CCAATCGAGA TTGCCGCCCC GCGAGTGGAG
TTCTTTTTCA CTGCGCTCAG CTACATTTCA CCACGACGCG TGCAGTTGCG CTACCAGCTC
GAAGGGTTCG ATCCGGGCTG GATCGAGGCC GGCGCCCGGC GCTCAGCGCA ATACAGCCTG
AAACCCGGTC GCTACGTGTT CCGCGTGCAG GCCGCCAACG CCGACGGCGT GTGGAACCAC
ACCGGCGATA CGCTGGCGTT GACGCTGCCC CCCCCTTTCT ACGCCACGCC GTGGTTCTAC
AGTCTCTGCG GGTTGAGCAT CGCCGGTGGG CTGTTCGCCG GCTTCCGCTG GAAGGTCCGG
CACATCCGCG CCGCCGAGCA CCGGTTGCGG GAGGAGAATG ACCGGCTCGA GGCGCGCATC
GCCGGTCGCA CCCGCGAGCT CGCGCGCTCC GTCGCTCTGC TGCACGCCAC GCTGGAGTCC
GTCACCGACG GCATCCTGGC GGTGGACCGC GCAGGCAAGA TCGTCTCGTT CAACACGAAG
TTTGCGGACC TGTGGCGGGT GCCCGCGACC GAGCTGCAGG GGACCGACGT CTCCCACCTG
CGCCGGCAGG TGGCGCACCT GGTCAAGGAT CCCGCCGCGT TCCTGAAACG CGCCGAGGAG
CTGCAACGCC ATCCAGAGAC GCCCGCGTTC GACGTGATTG AATTCAGCGA TGGCCGGCTG
CTCGAACGCT ACGTTTCGCC ACAGCTGGTC GAGGGGCGTT GCGTGGGATT CGTCGTCAAT
TGGCGCGACA TCACGGCGCG CAAGCGGGCC GAGGCGGCGA TCGCCGAAGC CAGCCGGATT
CTCGAATCGC TGCTCAAGCA CACGCTCGAC TTCGTTTACT TCAAGGACCG CGAGTCGCGC
TTCGTGCGGT ACAGCGATAC GATGCTGCGG CTCTTCGGCC TCACCGCGCC GGACGCGCTC
AAGGGCCGGA CCGATTTCGA TTGTTTCCCG GCGGAGCATG CGCGTGCGGC CTTCGCGGAC
GAACAGGAGA TCATGCGCAC GGGGCAGCCC ATGATCGACC GGCTCGAGCA ATTCACGCTG
CCGGACGGAC GCACCGCCTG GGCGCTGGCG ACGAAGATGC CCTGGCGCGA CGACCGGGGC
CAGATTATCG GCACGTTCGG CGTGTCCCGC GACATCACCG CCATCAAGCT CGCCGAGGCC
GAGCTGGCCT ACGAGCGCGA CCTGCTGCGC GGGTTGATGA ACAGCTCGCC CGACAAGATC
TACTTCAAGG ACCTCCGCTC GCGTTTCCTC CGCGCCAGCC GCGCCCAGGC CGAAAGTTGC
CGGGCGAAAT CCGAGGACGA GATGCTGGGC AAAACCGACT TCGACTATTT CACGCCGGAA
CACGCGCAAC CGGCGTTCGA CGATGAGCAG CGCATTATCC AGACGGGCCA GCCGGTGATC
GGCAAGGTGG AGAAAGAAAC GTGGCACGAT GGTCGCGTGA CCTGGGCGCT CACCAGCAAG
ATGCCGCTGC GCAACAACGT CGGCGAGATC ATCGGCACCG TCGGCATTTC CAAGGACATC
ACCGAGCTCA AGGAAGCGGA GGCGAAGCTG GAGCAGTTGC ACAAACAGCT GCTGGAAACC
TCGCGCGAAG CCGGCATGGC CGAGGTCGCC ACCAGCGTGC TGCACAACGT CGGCAACGTG
CTCAACAGTG TCAACGTCTC CACCGCGCTC GTCATCGGCA AGACGCGCGA CTCGAAGGTC
GGCAATCTCG CGCGCATCAC CGAACTGTTC CGCGCCCACG CCGGCGATCT CGCCTCCTTC
CTCACCCAGG ATCCGAAGGG CCAGAAGCTC CCCGCCTATC TGGAATTGCT GAGTGAACAG
CTCGCGGCCG AACAGGCCGC CATCGCCACG GAGCTCGAGC ATCTCCGGAA GAACGTCGAG
CACATCAAGG ACATCGTTTC GATGCAGCAG AGCTACGCGA AGGTCTGCGG CGTCAGCGAG
AAGGTCGAAC TCGTCGAGAT CGTCGAGGAC GCGCTGCGCA TCAACTCCGG CGCGCTCAGC
CGGCACGAGG TTCAGGTCGT TCGCGACTAT GCCGCGCGCC CCGTCCTGAT TCTCGAGCGG
CACAAGGTGA TGCAGATTCT CGTGAACCTG ATCCGCAACG CCAAGTACGC CTGCGACGAT
TCCGGCCGGC CGGACAAGCA GCTGACGCTG CGGATCGAAC AGGCGGCCGG CCGCGTGAAG
ATCATCGTCA GCGACAATGG CGTGGGTATT CCCGCGGAGA ACCTGACGCG GATTTTCGCC
CACGGATTCA CCACGCGGAA GGAAGGCCAC GGCTTCGGCT TGCACAGCGG CTCACTCGCG
GCGCGGGAGC TCGGCGGATC GCTGACGGCG CACAGCGACG GCCGCGGCTG CGGCGCGACG
TTCATTCTCG AACTGCCGGA CCCCGCTGCT CCCGGCCAAT GA
|
|---|
| Protein sequence | MNRRIHCWPL AFALGLLLSP SAHALDPAKS VYQFNVQNWT RHDGLQGNKV NAITQTSDGY
IWIGTQNGLL RFDGSEFTAL PAKLPEANSQ EIVSMAAAAN GGLWFALNAG GFGHWDGRDL
SRISDQRWND ANTNGHTLLG ARDGTVWTGT DRSIGRWMPE QPASSIFDES ITRVVCLHED
AQNRIWIGTQ ETGVFSWSDG RFTRFRDAEL TKHVIKGLAT APNGELWVAL EHELRRYDAN
GEPMALPAFS HPITALLVDR HGITWIGSAS GLVRYQDGQF STLKKIDGLA NEYVTALFED
REGSLWVGTQ SGLSQVSDLK FPIFSEKEGL HHGGSLTVTA AAAGGIWITT THGFAHFDGR
RFTNYTDPAL LSNPYVKLGL EARNGDFYWV DGDKSISVLS GGRLAARYSS SEWTEALTED
DEGVLAGVGP NLMRLKNGRL EPYSFKGDRR PEFQWFDNLA TARDGAIWVA CYNGLFRVKN
GEFRQWSTVD GLSGNRVHFV FEDGDGCIWA GLSTGMARIR GNDLRNITEA NGLFDNRTYA
IVPDDTGYFW VNSGRGIYRV SRQALHDFAD GRSSRIQCEP FDGEESVKFT DRVDQEYSGC
RSADGRIWFP NPWGVVMIDP ADYVVNRVPP PVHIQRVEVN GTAVAQVRDQ PIEIAAPRVE
FFFTALSYIS PRRVQLRYQL EGFDPGWIEA GARRSAQYSL KPGRYVFRVQ AANADGVWNH
TGDTLALTLP PPFYATPWFY SLCGLSIAGG LFAGFRWKVR HIRAAEHRLR EENDRLEARI
AGRTRELARS VALLHATLES VTDGILAVDR AGKIVSFNTK FADLWRVPAT ELQGTDVSHL
RRQVAHLVKD PAAFLKRAEE LQRHPETPAF DVIEFSDGRL LERYVSPQLV EGRCVGFVVN
WRDITARKRA EAAIAEASRI LESLLKHTLD FVYFKDRESR FVRYSDTMLR LFGLTAPDAL
KGRTDFDCFP AEHARAAFAD EQEIMRTGQP MIDRLEQFTL PDGRTAWALA TKMPWRDDRG
QIIGTFGVSR DITAIKLAEA ELAYERDLLR GLMNSSPDKI YFKDLRSRFL RASRAQAESC
RAKSEDEMLG KTDFDYFTPE HAQPAFDDEQ RIIQTGQPVI GKVEKETWHD GRVTWALTSK
MPLRNNVGEI IGTVGISKDI TELKEAEAKL EQLHKQLLET SREAGMAEVA TSVLHNVGNV
LNSVNVSTAL VIGKTRDSKV GNLARITELF RAHAGDLASF LTQDPKGQKL PAYLELLSEQ
LAAEQAAIAT ELEHLRKNVE HIKDIVSMQQ SYAKVCGVSE KVELVEIVED ALRINSGALS
RHEVQVVRDY AARPVLILER HKVMQILVNL IRNAKYACDD SGRPDKQLTL RIEQAAGRVK
IIVSDNGVGI PAENLTRIFA HGFTTRKEGH GFGLHSGSLA ARELGGSLTA HSDGRGCGAT
FILELPDPAA PGQ
|
|---|
| |