| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2542 |
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| Symbol | |
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| ID | 6207221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3273775 |
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| End bp | 3274200 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641692202 |
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| Product | putative PTS IIA-like nitrogen-regulatory protein PtsN |
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| Protein accession | YP_001819424 |
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| Protein GI | 182414358 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.289266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0608782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCGACC TGACGGCGAG TTCGCGGGAA GCGACCCTGC GCGCCCTGCA TGCTCGGCTA
TGCAGCGCGA CCGACGCGGT CAGCGATCCC GATCGTTTCC TGCTCGATCT GCTGGAGCGT
GCGATGGTGG CGCCGGTCTG CATCAGCGCG GACGTGGCGA CACCGCATGC GCGCACGACG
GCGGTCGAGC GGATCGTGCT CGGCGTGGCG CGGACCGCCG CGCCAGGCGT TGGGTTCGAC
GGCGAGCATC CCGCGGTACG GCTGATTTTC ATGATCGGGA CGCCGAAACA GCAGGTGACG
GAATATCTCG AGTTGGTGGC GACGATCTCG CGAGTGCTGA AAGTTGCCGG GGCGCGGGAG
GCGTTGCTCG AGGCGGAGAG TGAAGCGAAA TTCCGCGCTG CCTTGTCCCG CGCGGCGGCG
ACATGA
|
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| Protein sequence | MLDLTASSRE ATLRALHARL CSATDAVSDP DRFLLDLLER AMVAPVCISA DVATPHARTT
AVERIVLGVA RTAAPGVGFD GEHPAVRLIF MIGTPKQQVT EYLELVATIS RVLKVAGARE
ALLEAESEAK FRAALSRAAA T
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