| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2222 |
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| Symbol | |
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| ID | 6208071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2863759 |
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| End bp | 2864853 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641691877 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001819105 |
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| Protein GI | 182414039 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.827157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0630551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACCG ACTCCTCTCC TTCCGCCGAT CCCACTCCGG CACACCGCTG GCGCCGCCGC
GTGCTGTTGC TCGCCGGCCC TCTCCTCGTC GCGGTCGCCG CGCTATGGCT TTATTTGCAC
GGCGGACGCA TCGTCACCAG CGACAATGCC TACGTCCATG CCGACAAGCT CACCGTCACC
GCCGAGGTGG CCGGCGCGGT GAAGGATGTC GCCGTGCGTG AGAATCAGCC GGTCGCCGTC
GGCCAGGTGC TGTTCCGGCT CGATGACGAA CCCTACCGGA TCGCGCTCGC CGAAGCGCAG
GCCGAACTCG CCGCCGTGCG GCTGGAACTC GCCACGTCGC GCGCCAATTA CCAAGCCAAG
GTCGCCGCGA TCGGCGAGGC GCAGGAACAG CTCGCCTTCG CCGAGACCGA GTTGCACCGG
CAGGAGGAGC TGAATGCGAC CAACGTCGCG CCCGCCGCCG CGCTCGACCA GGCGCGGCAC
GCCGTCGAGT CCGCCCGCCG GCGCGTGTCG GTTCTGCAGC AGGAGGCCGC GACCGTGCTG
GCCTCGCTCG GCGGCGTCGA CCGACCGGAT GAACAGAATC CCGACTTCCT CGCCGCGCGG
GCGCGTGTCG CCAAGGCGCA ACGCGATCTC GCCCGCACCG TGATCACCGC GCCCATCGCC
GGCATCGTGG CCAACGTCAC CAATCTGCCC GTCGGCAAAT TCCTGCAGCC GGCGCAACCC
GCGTTCACGC TGGTCGCCGC CGATCACGTG TGGATTGAAG CCAACCTCAA GGAAACCGAG
CTCACGCATC TGCAGCCGGG CAATCCGGTA AAGATCGAAA TCGACACCTA CCCGCATCGC
CAATGGCTCG GACGCGTCGC CGCCATCGGC CCTGCCACGG GCGCCGAGTT CGCGCTGATC
CCGCCGCAGA ACGCCTCCGG CAACTGGGTC AAGACCGTGC AGCGCATCCC GGTGCGCATT
CGCGTGGAAT CCAACGACCC GGCGCGGCCG CTGCGCGCCG GCATGAGCGC CGAGGTCCGC
ATCGACACCG GCCACACGCG TGCGCTGCGC GACCTTGCCG GCAGCTTCGG CGAGCCGGAT
CAGGTTTCCG GATGA
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| Protein sequence | MSTDSSPSAD PTPAHRWRRR VLLLAGPLLV AVAALWLYLH GGRIVTSDNA YVHADKLTVT
AEVAGAVKDV AVRENQPVAV GQVLFRLDDE PYRIALAEAQ AELAAVRLEL ATSRANYQAK
VAAIGEAQEQ LAFAETELHR QEELNATNVA PAAALDQARH AVESARRRVS VLQQEAATVL
ASLGGVDRPD EQNPDFLAAR ARVAKAQRDL ARTVITAPIA GIVANVTNLP VGKFLQPAQP
AFTLVAADHV WIEANLKETE LTHLQPGNPV KIEIDTYPHR QWLGRVAAIG PATGAEFALI
PPQNASGNWV KTVQRIPVRI RVESNDPARP LRAGMSAEVR IDTGHTRALR DLAGSFGEPD
QVSG
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