| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2218 |
|---|
| Symbol | |
|---|
| ID | 6207501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 2857531 |
|---|
| End bp | 2859198 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641691873 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001819101 |
|---|
| Protein GI | 182414035 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0316012 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATCC TCATTTCCGT GCTCGCGGCC GCGCTGCTGA GCGGATCGAC CGGGCTGGGC
AACCAGCCAG AGACCGCCGC TCCGAACCTC GATCAGTTGC GCGCGATGAC GGCGCGGTTC
GTGCCAGTGG AGATCAAGGT GGACGTGTCC CATCTGCCGC CGAACGAGCT CGCGGCGCTG
CAGAAGATGG TGGAGGCGGC GAAGCTCTTC GACGCGCTGT TCCTGCGTCA AGCCGCGCCG
CAGAACGAGG CGCTGCTCGC CCAGCTGGTG CGCGACGCGT CGCCGCTGGG CCGGGCGCGG
CTGCACTATT TTCGAATCAA CGCCGGCGCG TGGTCGCGGC TGGACGAGCA GACGGCGTTC
CTGCCGGGCG TCAGCGAGAA GCCGGCGGGC GGCAACTTTT ATCCGGTCGA CGCCACCCGC
GATGAAGTGG ACCGCTGGAT GCAGCAGCTG CCGGCGGCGG AGCGCGCGAA GGCCACGGGA
TTTTTCACGA CGATCCGGCG TGCGCCGGAC GGCGGGTTGA TGGCGGTGCC CTACAGCGTG
GAGTATCAGA ACGAGCTGAT CCTCGCCGCG CGGTTGCTGC GCGAAGCGGC GGCGGAGACC
AAGCAGCCCA CCTTGAAGGC GTTTTTGGAA AAACGCGCGA CGGCGTTTTT GTCGAACGAC
TACTACGAGA GCGACCTCGC GTGGATGGAG CTCGACGCGA CGATCGAGCC GACGATCGGG
CCCTACGAGG TCTACGAGGA CGAGTGGTTT AATTTCAAGG CGGCCTTCGA AGCCTTCATC
GCGGTGACCG ATCCGGCGGA GACGGCGAAG CTGGGAAGCT TCAGCGGCCA TCTGCAGGAG
CTGGAGGATC ATCTGCCGAT CGACCCGCAG TATCGCAAGA AGCTCGGCGG CTATTCGCCC
ATCCGCGTGG TGAACCTGGC GTTCGGCTCC GGCGACGCGA ATCGCGGCGT GCAGACGGCG
GCGTTCAACC TGCCGAACGA TGAACGCGTC GTGGCGGAGA AAGGCTCGAA GCGCGTGATG
CTGAAAAACG TGCAGGAGGC GAAATTCGAA AACGTGCTCG TGCCGATCTC GCGGCGCGTG
CTGGCGAAGG CGGATCAGGG CCATGTCGCG TTCGAGCCGT TTTTCACGCA CATTCTGATG
CACGAGCTGA TGCACGGGCT CGGGCCGCAG ACGATCACGG TCAACGGGCG CGAGACGACC
GTGCGCAGCG AGATGAAGGA GTTGAATGGC ACCCTCGAAG AAGCGAAGGC GGACATCTCC
GGCCTGTGGG CGCTGCAGCA TCTGATGGAC CACGGCATGC TCGACCGTGC GCAGGAGCGC
GCAATGTACA CGACGTTTCT CGCGTCGACC TTCCGCACGC TCCGGTTCGG GCTGACGGAG
GCGCATGCGA AAGGCATGGC GCTGCAGCTG AACTGGCTGC TCGACGCGGG CGCGTTCACC
GTGGCGCAGG ACGGAACGTT CGCGGTGGAT CTGGTGAAAG TGAAACCGGC GGTCGAATCG
CTCACCCGCG CGATCATGAC GCTGCAGGCG CACGGGGACT ACGCTGGAAC GAAACAGCTC
TTTGAGAAAA TGATCGTAGT CCGGCCCGAG GTGAAACGCG CGCTCGACGG GTTGAAGGAT
CTCCCGGTCG ACATCGAACC GACGTTTGTG ATGGGGGAGA AGAGCTGA
|
|---|
| Protein sequence | MRILISVLAA ALLSGSTGLG NQPETAAPNL DQLRAMTARF VPVEIKVDVS HLPPNELAAL
QKMVEAAKLF DALFLRQAAP QNEALLAQLV RDASPLGRAR LHYFRINAGA WSRLDEQTAF
LPGVSEKPAG GNFYPVDATR DEVDRWMQQL PAAERAKATG FFTTIRRAPD GGLMAVPYSV
EYQNELILAA RLLREAAAET KQPTLKAFLE KRATAFLSND YYESDLAWME LDATIEPTIG
PYEVYEDEWF NFKAAFEAFI AVTDPAETAK LGSFSGHLQE LEDHLPIDPQ YRKKLGGYSP
IRVVNLAFGS GDANRGVQTA AFNLPNDERV VAEKGSKRVM LKNVQEAKFE NVLVPISRRV
LAKADQGHVA FEPFFTHILM HELMHGLGPQ TITVNGRETT VRSEMKELNG TLEEAKADIS
GLWALQHLMD HGMLDRAQER AMYTTFLAST FRTLRFGLTE AHAKGMALQL NWLLDAGAFT
VAQDGTFAVD LVKVKPAVES LTRAIMTLQA HGDYAGTKQL FEKMIVVRPE VKRALDGLKD
LPVDIEPTFV MGEKS
|
|---|
| |