| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2154 |
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| Symbol | |
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| ID | 6206355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2759214 |
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| End bp | 2759657 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641691807 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001819037 |
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| Protein GI | 182413971 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.770141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.098751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACGACA CGCAGGCCTT GAAAGACTTC CTTCAAAAAG GCGACCAGTT CGCACGGCAT
TGCGGACTCG AGCTCGTGTC CGTTGCGCCG GGCCGCGCGA TCGCGCGGCT CGCCGTGCAA
CCCCACCACC TCAACGCCAT CGGGCTCGTG CAGGGCGGCG CGATTTTCAC GCTCGCTGAT
TTCGCGTTTG CCGCCGCGTC GAATTCGCAC GGCACCGTCG CCGTCGGGAT CAACGTCAGC
ATCACCTACC AGCAAGCTGC GCGGTCCGGC GTGCTCACCG CCGAGGCGCA GGAAGTCGCG
CGGCACCCGA AGCTCGCCAG CTACACCGTG AACGTGCGCG ACGCGGCCGG TCAGCTCGTC
GCGATTTTCC AGGGACTCGT CTACCGCAAG CAGGAGCCCA CGCCGCCGGC GCGGGCGCCG
CATCCGCCGA CCGACGGCAG CTGA
|
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| Protein sequence | MHDTQALKDF LQKGDQFARH CGLELVSVAP GRAIARLAVQ PHHLNAIGLV QGGAIFTLAD
FAFAAASNSH GTVAVGINVS ITYQQAARSG VLTAEAQEVA RHPKLASYTV NVRDAAGQLV
AIFQGLVYRK QEPTPPARAP HPPTDGS
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