| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2070 |
|---|
| Symbol | |
|---|
| ID | 6206936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 2658535 |
|---|
| End bp | 2659149 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641691721 |
|---|
| Product | cytochrome c oxidase subunit III |
|---|
| Protein accession | YP_001818953 |
|---|
| Protein GI | 182413887 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.515134 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTC ACGCCGGCGC CATCGATCAC CATCAGGACG TCACCACGTC GACGGGCATT
CCCAACAAGA AGCTCCTCAT GTGGGCCTTC CTCGCGTCGG ACTGCATGTT CTTCGGCACG
CTGATCGCAT CGCATCTCAT CTACCGGCTC TATCCGCCGG CGGGCACGCC CAGCCCGAAG
GAGATCTTCG ATCTCCCGCT CACGTCGTTT TCGACGTTCA TCCTGCTGAT GTCGTCGCTG
ATGATGGCGC TGGCGGTGAA TGCGATTCAG AAGGGCAACG TTCGCAGCAT GCGCTTCTCG
CTGCTCACGA CCGCGTTCTT CGGCGCAATC TTCCTCGGCT GCCAGGTGTA CGAATTCACG
CACTTCGTGC ATGAGAAGGG GCTCACGATC ACCGGCAGCA TCCTCGGCTC GACCTTCTAC
ACGCTGACCG GCACCCACGG CCTCCACGTG CTCATCGGCG TGATCTGGCT GATGTCGATG
TATCTCTATT CCTTCACGGG CCGCGTCACG CAGAAGGAGG CGATCGATGT CGAGTCGATG
GGCCTCTACT GGCACTTCGT CGACATCGTC TGGATCGTGA TCTTCACCGC GGTCTACCTG
CTCGAATACC TCTGA
|
|---|
| Protein sequence | MSTHAGAIDH HQDVTTSTGI PNKKLLMWAF LASDCMFFGT LIASHLIYRL YPPAGTPSPK
EIFDLPLTSF STFILLMSSL MMALAVNAIQ KGNVRSMRFS LLTTAFFGAI FLGCQVYEFT
HFVHEKGLTI TGSILGSTFY TLTGTHGLHV LIGVIWLMSM YLYSFTGRVT QKEAIDVESM
GLYWHFVDIV WIVIFTAVYL LEYL
|
|---|
| |