| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2055 |
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| Symbol | |
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| ID | 6206109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 2641482 |
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| End bp | 2642807 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691706 |
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| Product | respiratory-chain NADH dehydrogenase domain-containing protein |
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| Protein accession | YP_001818938 |
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| Protein GI | 182413872 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.551264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGG TTGAGCAGGT CCGGCTCGCG GGCGTCGTCG GCGCAGGCGG CGGCGGATTT
CCGGCGCACA TCAAACTCGC CGGCAAGGCA GACGTGGTCA TCGCCAACGG CGCCGAATGC
GAGCCGCTTC TGCACAAGGA CGCGGCGGTG ATGGAGCGCA ATGCGCGGGA TCTGGTGACT
GGGCTGCAGC TGGCGATGGA GGCGGTCGGT GCGACGACTG GGATCGTTGG CCTGAAGGCG
AAGAACCAGC ACGCGCAGGA GGCGGTCACA GAGGCGTGCC GCGGCACGAC GATTCGCATT
CACCTGCTGG GCGATTACTA CCCGGCGGGC GATGAATACG ATCTTGTCTA TACGACCACC
GGTCGCTTGA TCCCACCGGC GGGCATCCCG CTTAACGTCG GCGCAGTGGT CAGCAACGTC
GAAACCCTCG TCAACATCGC CGCGGCCGCG GAAGGCCGAC CGGTCACGCA CAAGACGCTG
ACGATCGCCG GCGCGGTGGC GGCGCCCGCC ACGCTGACAG TGCCGCTGGG CACTACGCTG
CGCGCGTGCC TCGACGCGGC CGGCGGGCCG ACGGTGCTCG ATCCCGTGCT CTGCATTGGC
GGGATGATGA TGGGCGAGAC CACGACCGAT CTGGATCGGC CGGTGACGAA GACCACGGGC
GGCGTGATCG TGCTCCCGCG CAGCCATCGC ATCATCCAGC GAAAGCTGAA GCCCGCGACG
TTGCAGCACG CCATCGGCAA GTCGGCCTGC GACCAGTGCC GTTACTGCAC CGAATACTGT
CCGCGCTTCC TGCTCGGCTA TGCGGTGGAG CCGCACCAGG TGATGCGTTC GCTCGCGTTC
ACGGCGACCG GCGCCGCGCA CTGGAACGAC TGGGCCGCGT TGTGCTGCGC GTGCGGGCTG
TGCACGCTCT ACGCGTGTCC GGAGGAGCTT TTCCCCAAGG AGGCCTGTGA TCAGGCCAAG
GTCGAAATGC GGCGCGCAAA TGTAAAATGG TCCGGCCCGG CGACGGTGAA GCCACATCCG
ATGCGCGAGG GGCGCCGCGT CCCAATCAAG ACGCTGATGC GCAAGCTGCA TATTTCCGAC
TACGAGCATC CGGCGCCGTG GCGCGCGACG CAGATTTCCC CGAGCCGGCT GGTGATCGCG
TTGAAGCAAA GCGCCGGATC GCCGTGCCAG CCGTGCGTGC GCGCGGGCGA CGCCGTGGCC
GCCGGACAGA TGCTCGGCAA CGTTCCTGAG AAAGCGTTGG GAGCGGCGAT CCACGCGCCA
CTCACCGGAA CGGTGACGGA GATCACGCCG AATCACATCC TTCTCCAGGT CTCCCCAAAA
CCATGA
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| Protein sequence | MNLVEQVRLA GVVGAGGGGF PAHIKLAGKA DVVIANGAEC EPLLHKDAAV MERNARDLVT
GLQLAMEAVG ATTGIVGLKA KNQHAQEAVT EACRGTTIRI HLLGDYYPAG DEYDLVYTTT
GRLIPPAGIP LNVGAVVSNV ETLVNIAAAA EGRPVTHKTL TIAGAVAAPA TLTVPLGTTL
RACLDAAGGP TVLDPVLCIG GMMMGETTTD LDRPVTKTTG GVIVLPRSHR IIQRKLKPAT
LQHAIGKSAC DQCRYCTEYC PRFLLGYAVE PHQVMRSLAF TATGAAHWND WAALCCACGL
CTLYACPEEL FPKEACDQAK VEMRRANVKW SGPATVKPHP MREGRRVPIK TLMRKLHISD
YEHPAPWRAT QISPSRLVIA LKQSAGSPCQ PCVRAGDAVA AGQMLGNVPE KALGAAIHAP
LTGTVTEITP NHILLQVSPK P
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