Gene Oter_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2009 
Symbol 
ID6206598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2584413 
End bp2586254 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content61% 
IMG OID641691659 
Productheat shock protein 90 
Protein accessionYP_001818892 
Protein GI182413826 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.623088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA CGGCACCGCA AAAATTCGAG TTCCAGGCCG AGATCGCCCA GCTCCTCGAT 
ATTGTCACCC ACTCGCTCTA CACGGAGAAG GAAATCTTCG TGCGCGAGCT GGTGTCCAAC
GCCTCCGACG CACTGGAGAA GCTGCGCCAC CTGCAGCTCA CGGAAAAGGA GATCTACGAC
GACACGCTCA CGCTGGAGAT CAACGTCACC ACCGACGACA AGGCGAAGAC GATCACGATC
CAGGACTTTG GCATTGGCAT GACCCGGCAG GAGCTGGTCG AGAATCTCGG CACGATCGCG
CACTCCGGCT CCAAGGCGTT TCTGAAGGCG CTGGCCGAAA GCGAGCAGAA GAACACCAGT
CTGATCGGCC AGTTCGGCGT CGGCTTCTAC TCCGCGTTCA TGGTCGCCAA GTCGGTCAAG
GTCTACACGC ACTCGTGGCG GAAAGACGAA ACCGGCCAGC TCTGGACCAG CGAAGGCGCC
GGCAACTATT CGATCGAGGA AAGCAGCGGC GAGCGCCGCG GCGCGAAGAT CGTGATCGAG
CTGAAGGACG AGTGCTCGGA ATTTTCCCAA GACTGGCGGA TCAAGGAGAT CCTCGAGCGC
TACAGCGCGT TCGTGTCGTT CCCGATCAAC CTGAACGGCA AGCGCGTCAA CACCGTCCAG
GCCCTGTGGC TCCGCAACAA AAACGAGATC AAGGACGAGG AATACACCGA GTTCTACAAG
TTCCAGGCGC ACGCGTTCGA CGAGCCGCGG CTGCGGCTGC ACTTCTCCGC CGACGCGCCG
CTCGCGATCA ACGCGCTGCT GTTCGTACCG AAGGAAAACA CGGAAAAGCT CGGGTTCTCG
CGGCTCGAGC CGTCGGTCGC GCTCTACTGC CGGAAGGTGA TGATCGACGC CAAGCCCAAG
CACCTGCTCC CCGAGTGGCT GCGGTTCCTT AAGGGCGTCG TCGATAGCGA GGACCTGCCG
CTCAACATCT CGCGCGAGAC GATGCAGGAC AAGGCGCTGA TCGAGAAGCT GAACAAGGTC
ATCACGAAGC GCTTCCTGAA ATTTCTCGAG GACGAGGCGA AGAACCGCGT CGACGCCTAC
AACGAGTTTT ACGCCGAGTT TGGCTTCTTC CTGAAGGAGG GCGCCGCCGT CGACTTCACG
CACAAGGACC AGCTCGCGAA GCTGCTCCGG TTCGAGTCGT CGCTGACCGA GAAGGGCAAG
ACCACCAGTC TCGCCGACTA CGTCACCCGG ATGGGCAGCG AGCAGAAGGA GATTTATTAT
CTCTTCGGCC CGAACCGCGC GGCGATCGAA AGCGGCCCGT ATCTCGAAGG GTTCAAGGCG
CGCAATCTCG AGGTGCTCTT CTGCTACGAG TCAGTCGATG AGTATGTGAT GAACAGCCTG
CGCGAGTTCG ACGGCAAAAA GCTCACTGCC GCCGATCACG CCGACGTCAA GCTGTCCGAC
CTGCCGAAGC CCGAGGGCGC GCTGAGCGAG GACGACACCA AGAAGCTCAC GAGCTGGCTG
AAGGACACGC TGGGCGAGCG CGTCGCCGAG GTGAAAGCCA GCGATCGGCT CGTCGATTCC
CCGGCGCTCG CACTGAATGC CGACAAGTTC ATGTCGCCGC ACATGCGCCG CATGATGAAG
GCGCTGAACA AGGATGGCGC CGAGTCGCCG CTGCGCGTGA ACCTCGAGAT CAATCCGCGC
TCGGCCGTGA TCAAGCGGCT CTTCGAAACG CACACCGCTG CGCCGGATAA GGCCAAGCTC
GTTGCCGAAC AGATTCTCGA CAACGCGCTG ATCAGTGCCG GCCTGCTCGA CGACGCGACC
GCCATGGTCG CCCGACTCTA CAAGATTCTC GAAACCGCCT GA
 
Protein sequence
MSTTAPQKFE FQAEIAQLLD IVTHSLYTEK EIFVRELVSN ASDALEKLRH LQLTEKEIYD 
DTLTLEINVT TDDKAKTITI QDFGIGMTRQ ELVENLGTIA HSGSKAFLKA LAESEQKNTS
LIGQFGVGFY SAFMVAKSVK VYTHSWRKDE TGQLWTSEGA GNYSIEESSG ERRGAKIVIE
LKDECSEFSQ DWRIKEILER YSAFVSFPIN LNGKRVNTVQ ALWLRNKNEI KDEEYTEFYK
FQAHAFDEPR LRLHFSADAP LAINALLFVP KENTEKLGFS RLEPSVALYC RKVMIDAKPK
HLLPEWLRFL KGVVDSEDLP LNISRETMQD KALIEKLNKV ITKRFLKFLE DEAKNRVDAY
NEFYAEFGFF LKEGAAVDFT HKDQLAKLLR FESSLTEKGK TTSLADYVTR MGSEQKEIYY
LFGPNRAAIE SGPYLEGFKA RNLEVLFCYE SVDEYVMNSL REFDGKKLTA ADHADVKLSD
LPKPEGALSE DDTKKLTSWL KDTLGERVAE VKASDRLVDS PALALNADKF MSPHMRRMMK
ALNKDGAESP LRVNLEINPR SAVIKRLFET HTAAPDKAKL VAEQILDNAL ISAGLLDDAT
AMVARLYKIL ETA