Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1879 |
Symbol | |
ID | 6207101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2340136 |
End bp | 2340549 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641691527 |
Product | putative secreted protein |
Protein accession | YP_001818762 |
Protein GI | 182413696 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.562565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCTG GAAAACGCCC GACGCCTCGG TCCAACCGCG TGACCACCGA CCGCCAAAGT CTGCTCGCCT GTGAACGCGA ACTCACGCGC GCCGAGCGAA CTGGCGACGC CGCAACGCTG CGGGCTCTGC TCGCCCGCGA CTTCGTCGGC ATCGATCTGC ATGGTCGGAA GGTCACGCGG CGCACGTTCA TCGCCGGTTT CCTCCGCCCT GAACTTAAGC TCGCCCAGCT GCGCATCGAT GACCTCACCG TCCGCCGCAC GGGCGAGATG GCCTGCGTCG TGGGTCGCTC CCAATTCACC GGCACGTTCG CCGGCCGCCC CATCTCCGGC CGCGCGCGCT TCGTCGACGT GTGGATCCAC CGGCGTAGTC GCTGGCAGTT GATCGGTTCG TCCGTCACCC GTATCGAGCG CTAG
|
Protein sequence | MKSGKRPTPR SNRVTTDRQS LLACERELTR AERTGDAATL RALLARDFVG IDLHGRKVTR RTFIAGFLRP ELKLAQLRID DLTVRRTGEM ACVVGRSQFT GTFAGRPISG RARFVDVWIH RRSRWQLIGS SVTRIER
|
| |