Gene Oter_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1857 
Symbol 
ID6206158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2310502 
End bp2310831 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content62% 
IMG OID641691505 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_001818740 
Protein GI182413674 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID[TIGR03433] transcriptional regulator, Acidobacterial, PadR-family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA TCGACCTCCT CCAGGGAAAC CTCGAAATGA TGATCCTCCG CGTGCTTAGC 
ACCGGACCGC AGCACGGATG GAGCATCGCG CAACGCATCC ACGTCCTCTC CGCGGAGACG
CTGAAAATCG AGGAGGGTTC GCTCTACCTC GCGCTCTACC GCATGCAGCG CAAACGCTGG
CTCAAGGCCC GGTGGGGCAC GTCCGAAAAC AACCGCCGCG CCAAGTACTA CGAGCTCACC
GAGGCCGGCC TCCGCCAGCT TGAAAACCAG CACAGCGCCT GGGAACGACT CTGCACCGCG
ATCGCCACGG TGATGCACGC CGAATTGTAG
 
Protein sequence
MEKIDLLQGN LEMMILRVLS TGPQHGWSIA QRIHVLSAET LKIEEGSLYL ALYRMQRKRW 
LKARWGTSEN NRRAKYYELT EAGLRQLENQ HSAWERLCTA IATVMHAEL