Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1687 |
Symbol | |
ID | 6206880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2071230 |
End bp | 2071706 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641691334 |
Product | TspO and MBR like protein |
Protein accession | YP_001818571 |
Protein GI | 182413505 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCTT CGCGGTGGCT GCCGCTCGGC CTGTTTCTCC TGCTCGCCGC CTTCGCCGGC ACGATCGGTG CGATCGCCAC CGCCACCAGC GTTCACACGT GGTATCCGAC CTTGCAAAAG CCGGCGTGGA CGCCGCCGAA CTGGCTGTTT GGACCCGCTT GGACGTTGCT CTATATCCTC ATGTCCATCG CCGCGTGGCG CGTTTGGCGC GTCGGCGGCG AAGCCGATGC CCGGCATACC TCGCGGCTCT TTGCCGCCCA GCTCGCCCTC AACGCGCTCT GGTCGGTGCT TTTCTTCGGA CTGCACCGCC CCGGGCTTGC GCTCGTCGAG GTGATCGTGC TCTGGCTGGT GCTGATCCGG ATCTACGTGC GGTTTCGCGC CGCCGATCGG ATCGCCGGCT GGCTATGGTT GCCCTACCTG CTGTGGGTCA GCTACGCCAC GCTGCTCAAC GCTGCGGTGT GGGAACTCAA CCGCTGA
|
Protein sequence | MKSSRWLPLG LFLLLAAFAG TIGAIATATS VHTWYPTLQK PAWTPPNWLF GPAWTLLYIL MSIAAWRVWR VGGEADARHT SRLFAAQLAL NALWSVLFFG LHRPGLALVE VIVLWLVLIR IYVRFRAADR IAGWLWLPYL LWVSYATLLN AAVWELNR
|
| |