Gene Oter_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1687 
Symbol 
ID6206880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2071230 
End bp2071706 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content66% 
IMG OID641691334 
ProductTspO and MBR like protein 
Protein accessionYP_001818571 
Protein GI182413505 
COG category[T] Signal transduction mechanisms 
COG ID[COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTT CGCGGTGGCT GCCGCTCGGC CTGTTTCTCC TGCTCGCCGC CTTCGCCGGC 
ACGATCGGTG CGATCGCCAC CGCCACCAGC GTTCACACGT GGTATCCGAC CTTGCAAAAG
CCGGCGTGGA CGCCGCCGAA CTGGCTGTTT GGACCCGCTT GGACGTTGCT CTATATCCTC
ATGTCCATCG CCGCGTGGCG CGTTTGGCGC GTCGGCGGCG AAGCCGATGC CCGGCATACC
TCGCGGCTCT TTGCCGCCCA GCTCGCCCTC AACGCGCTCT GGTCGGTGCT TTTCTTCGGA
CTGCACCGCC CCGGGCTTGC GCTCGTCGAG GTGATCGTGC TCTGGCTGGT GCTGATCCGG
ATCTACGTGC GGTTTCGCGC CGCCGATCGG ATCGCCGGCT GGCTATGGTT GCCCTACCTG
CTGTGGGTCA GCTACGCCAC GCTGCTCAAC GCTGCGGTGT GGGAACTCAA CCGCTGA
 
Protein sequence
MKSSRWLPLG LFLLLAAFAG TIGAIATATS VHTWYPTLQK PAWTPPNWLF GPAWTLLYIL 
MSIAAWRVWR VGGEADARHT SRLFAAQLAL NALWSVLFFG LHRPGLALVE VIVLWLVLIR
IYVRFRAADR IAGWLWLPYL LWVSYATLLN AAVWELNR