Gene Oter_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1639 
Symbol 
ID6206719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2013518 
End bp2014765 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content64% 
IMG OID641691281 
Producthypothetical protein 
Protein accessionYP_001818523 
Protein GI182413457 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGCC TGGTTTACGA ATTGTTCGAG TCGCTGCGGA TCGCGTTCAC GCAGATCTGG 
GCGAACAAGA TGCGCTCGGC GCTCACCGCG CTCGGCGTGA TCATTGGCAT CGTGGCTGTG
ACGCTGATGG GCACGGCCAT CAAGGGCATC GACGTCGGCG TCGATCGCAG CTTTTCCGGG
TTCGGCGACG ACGTGCTGTA TGTGACGAAG TGGCCGTGGC ACGAAATCGA CGACTGGTGG
AACTACCGCA ACCGCCGGCC AATCCGGTTT GAATATGCGC GTCAGATCAA CGACTGGATT
GCGACGCAGC CGAACAGCGC GATCCGGCTC GCCGTCCCCG TGGCCAACCG CGGCACGAAC
GTGATCCGCG GCGAATACCG GGTGAACAAC ATCTGGACGA TGGGCACGAC GGCGGACTAC
GTGCGCATCG CCCGGTCGGA GATGAAGGAA GGGCGGTTCT TCAGCGAGTT CGAGGCGCAG
GCCGGTTCGA ACGTGGCGAT CATCGGCTAC GACGTGGCGG ATGCGTTGTT CGCCAACGAG
TCCGCGCTTG GCCAGACCGT GCGGATTCGC GATCAGAATT TCCGCGTGAT CGGGGTGGCG
GCGCGGCAGG GAAGTTTCCT CGGGCTGTTC AGCTGGGACT CGATGCTGGC CATGCCGCTC
ACGACGTATC GGCGTTATTT CCGGCTCAAT GATGACAACG AGATCCGCGT GCAGGTCGAC
GCGACGCGGA TGGAAGCGGC GCGCGATGAG CTCCGCGGGC TGATGCGCCG GCTGCGGCAG
CTCGGGCCGG AGCAGCGCGA CGATTTCGAG CTCAACGAGC AGGGCACGAT CCGGAAGCAG
CTCGATCCGA TTAAAAACGG CATCGCGATG GCGGGGCTGT TCATCACCGG GCTGGCGCTT
TTCGTGGGCG CGATCGGGAT CATGAACATC ACCTACGTGA GCGTGAAGGA GCGCACGAAG
GAGATCGGTA CACGCAAGGC GCTGGGCGCC CGCCGCCGGA CGATCCTGCT GCAGTTTCTC
ATCGAGGCGA CGTCGATCTG CTTCGTCGGT GGCACGGCCG GACTGTTGCT CGCCTACGGA
ATGTCCGTGC TCGTGGGGGC GGTCGCGCCC TCGTTCCCGC TGGTGTTCTC GGCCGGCTTG
GTGGTGACCG GTATCACGAT CTCGGTGCTC ACGGGCGTCT TCAGTGGCTT TGCGCCCGCC
TGGCAGGCTA GCAAACTCGA TCCGGTGGAG GCGCTGCGCT ACGAATGA
 
Protein sequence
MRRLVYELFE SLRIAFTQIW ANKMRSALTA LGVIIGIVAV TLMGTAIKGI DVGVDRSFSG 
FGDDVLYVTK WPWHEIDDWW NYRNRRPIRF EYARQINDWI ATQPNSAIRL AVPVANRGTN
VIRGEYRVNN IWTMGTTADY VRIARSEMKE GRFFSEFEAQ AGSNVAIIGY DVADALFANE
SALGQTVRIR DQNFRVIGVA ARQGSFLGLF SWDSMLAMPL TTYRRYFRLN DDNEIRVQVD
ATRMEAARDE LRGLMRRLRQ LGPEQRDDFE LNEQGTIRKQ LDPIKNGIAM AGLFITGLAL
FVGAIGIMNI TYVSVKERTK EIGTRKALGA RRRTILLQFL IEATSICFVG GTAGLLLAYG
MSVLVGAVAP SFPLVFSAGL VVTGITISVL TGVFSGFAPA WQASKLDPVE ALRYE