| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1619 |
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| Symbol | |
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| ID | 6206168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1989398 |
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| End bp | 1990651 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641691261 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001818503 |
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| Protein GI | 182413437 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.32489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCT TCACCTATAC CGCACGCGAC CGCTCAGGGC AGACCGTGTC CGACGCGGTC
GAGGCGCCCA GCCGCCGCGA TGCCCTCCGG CTGCTCGCCG CGCGCGGGTT GCACGTCATC
AGCGCCAGCG ACGCATCGCC CGCGCCCGTC AACGGCCGCG GTCGTTCCGC CAACGGCGCA
GCCACGCCCT CGCCGCGGTT GGAGCGCCGC CGCAACGTCG CCCGCGCCCA GCGACTGCCG
TTTCTCGAAT CGCTCCACGA TCTCACGACC AGCGGCATGT CCGCGGGCGA AGCCGTGCGG
CTGCTCTCGA CCCGCATCAA GGAGCCCGCG CTGCGCGCGC TCTGCTCGGC GCTGTGGGAA
CGGCTGAGCG AAGGCGCACC GCTCTCGCGG GCGATGTCGG ACTTCCCCGC CGTGTTCGAC
GCCGCCACGG TCAACCTCAT CCAGGCGGGC GAGGCCACGG GCTCGCTCAA CGAGACGCTC
GACCGGCTGA TCACCCACCT GAACGAGCAG CGCGAGCTGC GCCGGCAGCT GGTCGCCGCG
CTGGCGTACC CGATCTTCAT GGTCGTCGTC GCGACCGGCG TGATCCTGTT TTTCCTGTTC
TTCCTGCTGC CGCGATTGCA GGTCCTGCTG ACGTCACTCG GCGGGGAGCT GCCGATGTCC
ACGAAACTGC TCGTGGGGCT CGCCCAATTC GCCCTGCACT ACGGGTTGTT CGTTGCTCTC
GGACTCGTGC TCGGCGCCAT CGCTTTCTGG CGCTGGCGGC ACACCGAGCC AGGCCGCCAG
GCGACGGACG CATGGCTGCT CAAGCTGCCG GTGGTCGGCC CGTTCGTGGT GTCGCAGACC
GTGCTCGCGT TCAGCCAGAC GCTCGGCGTG CTGCTCGCCA ACGGCATCAC CGCCGCCGAA
GCGCTGCGGA TGACGGAGCG GCAGATCGCG AACCGCGTGC ACCGGCGCGC CTTCGACGAG
GCCACCGCAC GCGTGCTCGA GGGCGAGGCG CTGTCGCTCG CCCTCGGCCG CACGGGGTGC
TTCCCCGATC TCGTGCTCGA CCGGCTCGCG GTCGGTGAGA ACACCGGCAA TGTAGTGCCC
AGCCTGCGCG ACATCGCGCG GAGTTATCAG AAGATCGTTT CGAACCAGCT CAACCTGTTC
ACCAAGGTGA TCGCCAGCGG CGTGCTGCTG CTGGTGTTCG TGCTCGTCGG CTTCATCGCG
TTCGCGATCG TCAGCGCCGT GTTCAAGGTC AGCGGCAGCT TCAAGCTGGG CTGA
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| Protein sequence | MPRFTYTARD RSGQTVSDAV EAPSRRDALR LLAARGLHVI SASDASPAPV NGRGRSANGA
ATPSPRLERR RNVARAQRLP FLESLHDLTT SGMSAGEAVR LLSTRIKEPA LRALCSALWE
RLSEGAPLSR AMSDFPAVFD AATVNLIQAG EATGSLNETL DRLITHLNEQ RELRRQLVAA
LAYPIFMVVV ATGVILFFLF FLLPRLQVLL TSLGGELPMS TKLLVGLAQF ALHYGLFVAL
GLVLGAIAFW RWRHTEPGRQ ATDAWLLKLP VVGPFVVSQT VLAFSQTLGV LLANGITAAE
ALRMTERQIA NRVHRRAFDE ATARVLEGEA LSLALGRTGC FPDLVLDRLA VGENTGNVVP
SLRDIARSYQ KIVSNQLNLF TKVIASGVLL LVFVLVGFIA FAIVSAVFKV SGSFKLG
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