| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1507 |
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| Symbol | |
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| ID | 6207970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1869548 |
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| End bp | 1871932 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641691148 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001818391 |
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| Protein GI | 182413325 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTAC CCAATCCGGA TCACGTCCTG CGCCTCGCCC AGGAACTCAA CGTCAAAGTT
TTTCAGGTCG CCGCCACGGC GCAGCTGCTC GCCGAGGGCG CCACGGTGCC GTTCATCGCC
CGCTATCGCA AGGAAGTGAC CGGCGAGCTC GACGAGACGC AGGTTCTCGC CATCCGCGAC
CGACTCGATC ACCTCACCGC GGTCGACGAG CGCCGCGCCG CGATTCTCAG TTCGCTCAAG
GAGCGCTCGC TGCTCACCCC CGCGCTCGAG CAGGCGATCC AGGCCGCGGA CACGCTGACC
GCACTCGAGG ACCTTTATCT GCCGTTCCGA CCGAAAAAAC GCACGCGGGC CACGATCGCG
AAGGAAAAAG GCCTCGAGCC GCTCGCCGAG TTGCTGTTCG CACAGGACCC GGCCACCGAC
GCCGTCGCGG CCGCGCAGGC CTACGTCGGC CGCGAATATG TCGCGGACGA CGGCAAGAAT
CAAAAATCCA AAATCGAGAC GGTGGACGAA GCGCTCGCCG GCGCGCGCGA CATCATCGCC
GAGCGGATCT CGGACGACAA GGACGCCCGC ACGCGGCTCC GCGCCCGCTA CCAGTCCGAC
GCGATCGTCT CGTCCAAGGT GCTCATCGGC AAAGACGCCG ATCCCGAGGC GGCGAAATAC
AAGGACTACT TCGAGTGGAG TGAACCGCTC GCGAAGGCCC CTTCGCACCG GATTCTCGCG
ATGCGCCGCG GCGAAAAGGA ATCGTTTCTG ATGATGCGCG TGACGCTGCC CGACGAGACG
CTCGCCGTCG CCGAGGTCGC GCCGCTGTTT GTGAAGGCCG CGCGCGTTGC CCCCAACGCG
TCGTCGTCCA CGCTCAACTC GACCTGCTCG GATCAGGTCC AACTCGCGGT CGCCGACGCC
TGCAAACGGC TGCTTTGCCC CGCGATGGAG ACGGAGATGC GGCTCGACTC GAAGAAACGC
GCCGATGAGG CCGCGATCAG GGTCTTCACT GGCAACATGC GCGAGCTCCT GCTCGCCCCG
CCGCTGGGCC AAAAGGCCGT GCTGGCCATC GACCCGGGCT TCCGCACGGG CTGCAAGGTC
GTGCTGCTCG ATCGGCAGGG CAAACTGCTC CACAACGACG TCGTCTTTCC CGACCGCCAC
GAGCAGGAGG CGCGCGACAA ACTCGCCGGT TTCGTCCAGT TCTTCAACGT CGAGGCGATC
GCGATCGGCA ACGGCACCGC CGGTCGCGAA ACGGAGGCGT TCGTCCGCAA GCTCGGGCTG
CCCGCCACGA TTCCGATCGT GATGGTCAAC GAATCCGGCG CTTCGATCTA CTCGGCCAGC
GAGGTCGCAA GGGAGGAGTT CCCCGACCAC GATCTCACCG TGCGCGGCGC CGTCTCGATC
GGCCGCCGGC TGATGGATCC GTTGGCGGAG CTCGTGAAGC TCGATCCGAA ATCGATCGGC
GTCGGCCAAT ATCAGCACGA TGTCGACCAG ATTGCGCTCA AGCGCTCGCT CGACGACACC
GTCGTCAGCT CGGTCAACGG CGTCGGCGTC GAACTCAACA CCGCCTCGAA GCAGCTGCTG
AGTTACGTCT CCGGTCTGAA CGCCACCACC GCCGCCGCAA TCGTCGCGCG CCGCAACGAG
CATGGCCCGT TCAAATCGCG CGCCGAGTTG AAGGAGGTGC CGCGGCTCGG CCCGAAGGCC
TTCGAGCAAG CCGCCGGTTT TCTTCGGATC CGCCACGCGA CCCATCCGCT CGACGCCAGC
GCGGTGCACC CGGAGCGTTA TGCGCTCGTC GAGAAAATGG CGGCCGATCT CGGCGCCACC
GTCGCGGATT TGATGCGCGA GGGGAAACTC CGCGCGAAGC TCAAGCTCGA GGCGTACGTC
ACCGCCGACG TCGGACTGCC CACGCTCAAC GACATCATGG CCGAGCTCGC GAAGCCCGGC
CGCGATCCAC GCGAAAAATT CGAGGCGTTC GCGTTCGACG CGAACGTCCA CGAGCCGAAG
GACCTGAAGC CCGGCATGAA GCTGCCCGGC ATCGTGACGA ACGTCACCGC ATTCGGCGCG
TTCGTGGACA TCGGCGTTCA CCAGGACGGC TTGGTCCACA TCAGCCAGCT CGCCGACACC
TTCGTGAAGG ACGCCGCGAC CGTGGTGAAG CCGCAGCAGA AGGTGACGGT GACGGTCGTC
GAAGTCGATC TGGCGCGGAA CCGGATCGCG CTCTCGATGC GCAGCAATCC CGAAATCGGC
CCGCGCCCCT CATCCGGCCC TGGGACCGCG ACGCCCTCGT CGCGGTCGTT TTCCTCGTCA
CGACCGTCGT CGGGTCCGCG CTCCGGATCG CCCGCGCCAG CTCCACGCGC GCCGCAATCA
CTCAACTCCG ACTGGTTCTC CGCCGCGCTG AACAAAAAGC GGTAG
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| Protein sequence | MALPNPDHVL RLAQELNVKV FQVAATAQLL AEGATVPFIA RYRKEVTGEL DETQVLAIRD
RLDHLTAVDE RRAAILSSLK ERSLLTPALE QAIQAADTLT ALEDLYLPFR PKKRTRATIA
KEKGLEPLAE LLFAQDPATD AVAAAQAYVG REYVADDGKN QKSKIETVDE ALAGARDIIA
ERISDDKDAR TRLRARYQSD AIVSSKVLIG KDADPEAAKY KDYFEWSEPL AKAPSHRILA
MRRGEKESFL MMRVTLPDET LAVAEVAPLF VKAARVAPNA SSSTLNSTCS DQVQLAVADA
CKRLLCPAME TEMRLDSKKR ADEAAIRVFT GNMRELLLAP PLGQKAVLAI DPGFRTGCKV
VLLDRQGKLL HNDVVFPDRH EQEARDKLAG FVQFFNVEAI AIGNGTAGRE TEAFVRKLGL
PATIPIVMVN ESGASIYSAS EVAREEFPDH DLTVRGAVSI GRRLMDPLAE LVKLDPKSIG
VGQYQHDVDQ IALKRSLDDT VVSSVNGVGV ELNTASKQLL SYVSGLNATT AAAIVARRNE
HGPFKSRAEL KEVPRLGPKA FEQAAGFLRI RHATHPLDAS AVHPERYALV EKMAADLGAT
VADLMREGKL RAKLKLEAYV TADVGLPTLN DIMAELAKPG RDPREKFEAF AFDANVHEPK
DLKPGMKLPG IVTNVTAFGA FVDIGVHQDG LVHISQLADT FVKDAATVVK PQQKVTVTVV
EVDLARNRIA LSMRSNPEIG PRPSSGPGTA TPSSRSFSSS RPSSGPRSGS PAPAPRAPQS
LNSDWFSAAL NKKR
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