| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1428 |
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| Symbol | |
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| ID | 6205976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1791339 |
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| End bp | 1792580 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641691070 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001818313 |
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| Protein GI | 182413247 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCC ATCTTGCCCG CGCCCAACTG CTACTCGCAC AATCCCGGCC CGGCGAGGCC
GAACGGGAGG CGATGCTTGC ACTCTCCGCG GACCCCCAAG ATACCGCGGC GCTCGCGTTG
CTCGCGCTTA GCCGTTGCGC CCAGCAGAAA CGCCCGGAAG CGCTCGCGGC CGCCGAATCC
GCGGTCGGTC TCGCGCCCGA CAACGCGTAT TTGCACTACG TGCACGCGTT GACGCTCCAC
CACCTCGATC GCGAGGACGC CGCTCACAGC GGGATCAATG CCGCGCTCCG CTTGAATCCG
GAGGACCCCG ACTTTTTCTC GCTGCTCGCA GGCATCGAGC TCGCCCGCGG CAACGCGCCC
GCGGCCCTCA CCGCCGCGGA GCAGGCACTT GCCATCGACT CCGAGCACGT GGAAGCGGCG
AATCTTAGGG CAATGGCATT GGTGCGCCTC GGACGCAAAG CTGAGGCGAC CGAAACGGTC
GATTTCGCCC TCCAGCACGC GCCCAACAGC GCGTTATCCC ACGCGAACCA AGGCTGGACC
TACCTTCACC GCAACGATCC CCGGCGGGCA CAGGAGTTTT TCCGCGAAGC GTTGCGGCTC
GATCCAACGA TGGAGTTTGC GCGACAGGGT ATGCTCGAAG CGCTCAAGGC CCGGAACCCA
GTCTACCGCG CCATGCTTGC CTACTTTCTC TGGATGGGTC GCCAGGGAGC AAAGCTCCAA
TGGGGCATCA TCATCGGGAC CTATTTCTTC TCGCGGTTTC TGAACAGTCA GCTGCGTGGT
GCGGAGCACG CCTCGTGGGC CCTGATACTG CTGGCGCTCG TGTTTTATCT CTTCGTCTAT
CTCACATGGA CCGCGCACCC GATGTTCAAC CTGCTGCTGC GGTTCGATCG GTTCGGACGA
TACGTTCTCT CGCGTGACGA ACGGATCGCC ACGTACTGGT TTGGCCCGCT TGCCGGAGCC
GCTGTCGCCG CGCTGACCTG GTGGGTGGTG ACCCGCGCGG GGCTCCCGTT GCTGGCCACA
CTGTTGCTTG CGGCGCTGTC GATCTGCGGC GCGGCCACGT TCCAGCGCCA GAAACGCGCC
CGGTTGATTC TCGGCGGCTG CACGGTGCTG CTCGCTCTCG TCGCGGCGAT GGTGGTTTTC
GAGGTGGTGA TTGGCCCAGT TGTGGCCGGC GGTGGCGTCA TGAGCGTCTT CGTGATGGGT
TTTCTTGGCA TCCAAATTCT CGCGAACGTA CTGAGTCGCT GA
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| Protein sequence | MSAHLARAQL LLAQSRPGEA EREAMLALSA DPQDTAALAL LALSRCAQQK RPEALAAAES
AVGLAPDNAY LHYVHALTLH HLDREDAAHS GINAALRLNP EDPDFFSLLA GIELARGNAP
AALTAAEQAL AIDSEHVEAA NLRAMALVRL GRKAEATETV DFALQHAPNS ALSHANQGWT
YLHRNDPRRA QEFFREALRL DPTMEFARQG MLEALKARNP VYRAMLAYFL WMGRQGAKLQ
WGIIIGTYFF SRFLNSQLRG AEHASWALIL LALVFYLFVY LTWTAHPMFN LLLRFDRFGR
YVLSRDERIA TYWFGPLAGA AVAALTWWVV TRAGLPLLAT LLLAALSICG AATFQRQKRA
RLILGGCTVL LALVAAMVVF EVVIGPVVAG GGVMSVFVMG FLGIQILANV LSR
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