Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1362 |
Symbol | |
ID | 6208678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1695527 |
End bp | 1697200 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641691003 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001818247 |
Protein GI | 182413181 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3664] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.938738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAC TCCTCTCCCT TTTCTCGGCG GTCTGTTTCG CGTCGCCTCT CTTCGCCGCG GACGCTCCTT TCCCCGTTTC CGTCACCGTC GACGCCGCGC ACTCGCTCGG GCCACTCAAG CCCGTCTGGC GATTCTTCGG CGCGGACGAG CCGAACTACA CGACGATGAA GGACGGCCGC CGGCTGCTCG GCGAACTCGG CACCCTCCGG CCCGGTGAGG TCTATTTCCG CACCCACAAC CTGCTCACCA GCGGCGATGG CACGCCGGCG CACAAATGGG GCAGCACGAA CGCCTACACC GAAGACGCCG CCGGCCGACC TGTGTACGAC TGGACGATCG TCGACCGGAT TTTTTCCACC GGGCTGGCGC GAGGCGTGCG GCCGTACGTC GAGATCGGTT TCATGCCGCA GGCGCTGTCG ACGCACCCGG AACCTTATCA GCACGAGTGG CGTGCCGGCT TGCCTTACGA GCGGATCTAC ACCGGCTGGG CTTATCCGCC CAAGGATTTC GAAAAATGGG GCGAACTCGT TTACCAGTGG GCGAAGCACT GCGTGGAAGA ATTCGGCGCG GCCGAGGTCG AGCGCTGGTA TTGGGAAACC TGGAACGAAG CCAACATCCC TTACTGGCAG GGCACCCCCG AAGAGTTCAT CAAACTGCAT GACTACGCGA TCGCCGCGGT CCGCCGCGCA CTGCCCACGG CGCGGGTCGG CGGACCCGAT TTCGCCGGAC ACGGCGGCCC GCGGATGCAC GAGTTCCTCG AGCACTGCCT GCGCGGGAAA AATCATGCGA CCGGCGAGAC CGGCACGCCG CTCGATTTCA TTTCGTTTCA CGCCAAAGGC TCGCCGGCGT TCGTCGACGG GCACATTCGG ATGGGCATCG CGCCGCACCT GCGCACGCTC GACGAGGGCT TCGCGATCGT TGCGTCCTAT CCGGAGCTGA AGGCGAAGCC GATCGTGATC GGCGAGTCCG ATCCCGAGGG CTGCGCCGCG TGCATGGGCG GGCAGTTCAC GTATCGCAGC GGCACCGTGT ACTCGAGCTA CACGGCGGCG AGTTTCGCGC GCAAATACGA TTTGGCGGCG AAGCACGGCG TGAATCTCGA GGGCGTGCTC ACCTGGGCGT TCGAGTTCGA GGATCAGCCG TATTTCGCCG GCCAGCGCGT GCTCTCCAGC AACGGCATCG CCCTGCCCGT GCTGAACGTC TTTCGGATGT TCAGCCGGCT CGGCACCGAG CGCGTCGCGG CGGAAAGCTC GGGCGCGATC CCCCTCGACG ACATTCTCCG GCAGGGCGTC CGCCGCGCGC CGGATGTGGG CGCGTTCGCC AGTCGCGACG CGCATCAGGT CGCGGTCGTG CTATGGCATT ACCACGATGA CGACGTCGCC GGCCCCGATG CCGCGGTGGA GTTCGCCGTG CGCGGTCTGC CCGACACGCT CCGCACCGCC CGCGTGAGTC ACGCTCGAAT CGATGCGACG CACAGCAACG CCTTCGCCGA GTGGAAGCGG ATGGGCACCC CGCTGGCGCC GAACCAACAG CAGTACGATG CACTGCAACG GGCCAGCCAG CTCGCGCAGC TGGCTGAGTC GCCTGCTTCC GTCGCCGTCG AGAGTGGTGT GGCGACGCTG CATTTCGCGC TGCCGCGGCA GGCCGTGTCG CTGGTCGTGC TCGAATGGGA GTGA
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Protein sequence | MKRLLSLFSA VCFASPLFAA DAPFPVSVTV DAAHSLGPLK PVWRFFGADE PNYTTMKDGR RLLGELGTLR PGEVYFRTHN LLTSGDGTPA HKWGSTNAYT EDAAGRPVYD WTIVDRIFST GLARGVRPYV EIGFMPQALS THPEPYQHEW RAGLPYERIY TGWAYPPKDF EKWGELVYQW AKHCVEEFGA AEVERWYWET WNEANIPYWQ GTPEEFIKLH DYAIAAVRRA LPTARVGGPD FAGHGGPRMH EFLEHCLRGK NHATGETGTP LDFISFHAKG SPAFVDGHIR MGIAPHLRTL DEGFAIVASY PELKAKPIVI GESDPEGCAA CMGGQFTYRS GTVYSSYTAA SFARKYDLAA KHGVNLEGVL TWAFEFEDQP YFAGQRVLSS NGIALPVLNV FRMFSRLGTE RVAAESSGAI PLDDILRQGV RRAPDVGAFA SRDAHQVAVV LWHYHDDDVA GPDAAVEFAV RGLPDTLRTA RVSHARIDAT HSNAFAEWKR MGTPLAPNQQ QYDALQRASQ LAQLAESPAS VAVESGVATL HFALPRQAVS LVVLEWE
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