Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1304 |
Symbol | |
ID | 6205121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1616894 |
End bp | 1618066 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641690945 |
Product | major facilitator transporter |
Protein accession | YP_001818189 |
Protein GI | 182413123 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCTCCG CTGCGCGCGC CTCATTGCTC CTCCTGCCGA TCATCTATCT CGGCTACATC AGTCTGGGGC TGCCCGACGG CACGCTGGGC GTCGCGTGGC CGCAGATGCA CCGCACGCTC GCGCTGCCGA TCGGCCTCGC CGGCGTGCTC GGCGTCGTCG GGCTCCTGCT CACCGCGTTC TCGGGATTCT CCAGCGGCCG GATCATCGCC CGGTTCAGGA CGGGGCCCGT GATGCTCGTC AGCTGCGTGC TGACGGCCTC GGGGATGATG CTGTTTTCCC ACGCTCCCAA TTTTGGCTGG CTCCTGCTCG CGGTCGTCCC GCTGGGGCTG GGCGCAGGGG CCGTCGACGC GGGGCTGAAC GGCTACGTCG CGCGGCACTA CACCGGCCGC CACATGAACT GGCTGCACGC CTGTTGGGGA ATCGGAGCGA CGTGCGGGCC TTTGTTGATG GCCCGGGCGT TGACGACGGC CGGCAGTTGG CGGACGGGGT TCGCCTGGCT GGGCACCGCG CAGTTCTCGC TCGCGCTGGT GTTCCTGCTT TCTTTCTCGC TCTGGAACGC GGTTCCGGAG CGATCGTTCG CCACCTCCGC CGGCCGGGCC GACCGCGCGA TCCCCACGCT GCACGCCAAC TCGCGCGCCG GCTGGCTCTC GGCGGTGATC TTCGCACTCT ACGTCGCCGC CGAAGGCACG GCCGGGCTTT GGGCCGGCTC CATCCTCGCC GTCGGCCGCG GGTTCGCGGT GGAGACTGCC GGGCTCTGCG CAAGTGCGTT CTACGGCGCG ATCACCGCCG GCCGGATTTT TGTCGGGTTC GTGGTGGAGA AACACGGCAA CCGCCGGCTC ATCGCCTGGG GCCTCGGGCT CGCCGCCGTC GGCGCGTTGC TCTTCCTCGT CGCCTCCACC CCGCCGCTCG CCGCGCTCGC GCTCATCCTG CTGGGGCTCG GCTTCGCGCC GGTCTACCCC TGCCTGATGC ATGAAGTACC GCGACGCTTC GCCCCGGAGT CGGTGCAAAC CGTGATCGGC CGCCAGTCCG GCGCCGCCAG CATCGGCGGC GCGGTCATGC CCGCGCTCGC CGGTTCGGTC GCGGAATTTT CGCTGGAAGG CATCCCTTGG ATGATCGTCA CCGGCTTGAT CGCGCTCGCC TTCGCGATCC GCTGGCTCAA CCGGCTGAGC TAG
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Protein sequence | MLSAARASLL LLPIIYLGYI SLGLPDGTLG VAWPQMHRTL ALPIGLAGVL GVVGLLLTAF SGFSSGRIIA RFRTGPVMLV SCVLTASGMM LFSHAPNFGW LLLAVVPLGL GAGAVDAGLN GYVARHYTGR HMNWLHACWG IGATCGPLLM ARALTTAGSW RTGFAWLGTA QFSLALVFLL SFSLWNAVPE RSFATSAGRA DRAIPTLHAN SRAGWLSAVI FALYVAAEGT AGLWAGSILA VGRGFAVETA GLCASAFYGA ITAGRIFVGF VVEKHGNRRL IAWGLGLAAV GALLFLVAST PPLAALALIL LGLGFAPVYP CLMHEVPRRF APESVQTVIG RQSGAASIGG AVMPALAGSV AEFSLEGIPW MIVTGLIALA FAIRWLNRLS
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