| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1258 |
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| Symbol | |
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| ID | 6205650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1552492 |
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| End bp | 1554144 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641690899 |
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| Product | beta strand repeat-containing protein |
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| Protein accession | YP_001818143 |
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| Protein GI | 182413077 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.305666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.49742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGGG TGTTAGCATT GTTAGTGATC GGGATATCGG GGGCGCTCGC TGCCGCCGAC
GAGTCGGCGA GCTACACGGT CTCTGGTGGC ACCGCTGAAG TTTCGACGAC TGCCACCTAC
GATGGAGAAG GTCACGCGGT CGAAGTGGGC GAGACCGGCT TTGAAGTTGT CGGTGCGCCG
CATCAAGACG GCTTGATCGT CAACGGCGGT GGTAAACTGA CGCTCCTCAG CGGCGCTGCA
GTGACCGTGG CAAGTGATGC CAGCAGCAAC AAAACAGTCT TCATGCGCGT GGGCTATGGC
ACCGAGGGAT CGCTGGTGAT GCAGAGCGGC TCGGCGCTCA CGGTCGGTAG CTCGGAGCGC
TACGCGAACT TTCAAGTCGG CCAGGGAGCC TCCGGCACCA ACGGCACGGT GACTCAGAAT
GGCGGAGCGA TCACGGTGTT TGGATCCTTC AACGTCGGCG TGAACGGCGG TAAGGGCGTC
TATACGATCA ACGGCGGCTC GCTCACCTTC GATCACACCG GCGCTACGGC CACGGACGGG
CGGACGTCGC TGATCTCGAT CGGCATGAAC AACGCCACAA CATCGTTTGG CACCTCGTCG
GGCACGATGA ACATCGCGGG CGGCTTGGTG GAAGCGAAGC CGGTGGAGCC GGGTGCTGCG
ATCGGCATCA TCATCGGCAA CCGGGCATAT GATGCGCGGC CCGGCTACAG CGGCCAGGCA
ACCAACTCGG GCAACGCGGG AGCGGGTGAA GGCATCGTGA ACCAGACCGG CGGCCGGTTC
CGGATCGGCT CGGGCGCGAA TCTCTATCTC TCCGGCCAAG GCAATGGGAC CTACAACCTA
AACGACGGCA CGCTGGAAAT CGGCGGATGG TCACTCCACA CGAGGTACGG CGGCTCCACC
ACATCAACTT ACGCGCTCAA CCTTGGTGGC GGCACGATCA AGGTGATCGG CTCTGCGCTC
AGCACCGACG TCAATGCGAC GCTCGTCGCC GGCAGCACTT CCACCATCGA CACCAACGAA
CTCGGCGCGA CGTGGTCGGG TGTGCTCAGC GGCACCGGTG AGTTGACGAA AGCGGGCGCG
GCTACGCTGA CGTTGAGCGG CAGCAACACG TTCTCTGGTG GTACGACGGT AAGCGCCGGC
ACGCTGCTGG TCAGTGGAGC GCTGACGAAT TCCGCGGTCA CCGTCGAATC CGGTGCCACC
CTCGCCGGCC GGGGCACGAT CAAGTCGGTC GCCGTCCTCG GCGGCGGAAC CCTGGCCCTG
GGCGACACGC GCGGGACCAT GAACATCACC GACGATCTCA CGCTCGCGGG GACCAGCACG
GTGGCCCTTT ATCTTGCGAG TGACTCGAGC TACGACCATC TGGCCGTGGG CGGAACCATT
TTCGCCAACG GAATACTTTC CGTCCAACTG GCCGGAACCT ACAGCCCGCT GACGGGCGCG
AGCTTCGACC TGTTCGATGG CACGTTCAGC GGTGTTTTCA GCGATCCCCA ACTTCCCTCG
CTCGGCACCG GGCTGATGTG GAACACCAGC GCGCTCTACA CCGATGGTGT GATTTCGGTC
CAAGCCATCC CGGAACCGGC AACGTGGGCC GGCCTCGCGG GCCTATTGGG ACTTGCGGTG
GCGATGTGGC ATCGCCGACG GGCGCACGCC TGA
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| Protein sequence | MGGVLALLVI GISGALAAAD ESASYTVSGG TAEVSTTATY DGEGHAVEVG ETGFEVVGAP
HQDGLIVNGG GKLTLLSGAA VTVASDASSN KTVFMRVGYG TEGSLVMQSG SALTVGSSER
YANFQVGQGA SGTNGTVTQN GGAITVFGSF NVGVNGGKGV YTINGGSLTF DHTGATATDG
RTSLISIGMN NATTSFGTSS GTMNIAGGLV EAKPVEPGAA IGIIIGNRAY DARPGYSGQA
TNSGNAGAGE GIVNQTGGRF RIGSGANLYL SGQGNGTYNL NDGTLEIGGW SLHTRYGGST
TSTYALNLGG GTIKVIGSAL STDVNATLVA GSTSTIDTNE LGATWSGVLS GTGELTKAGA
ATLTLSGSNT FSGGTTVSAG TLLVSGALTN SAVTVESGAT LAGRGTIKSV AVLGGGTLAL
GDTRGTMNIT DDLTLAGTST VALYLASDSS YDHLAVGGTI FANGILSVQL AGTYSPLTGA
SFDLFDGTFS GVFSDPQLPS LGTGLMWNTS ALYTDGVISV QAIPEPATWA GLAGLLGLAV
AMWHRRRAHA
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