| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1249 |
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| Symbol | |
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| ID | 6205979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1539422 |
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| End bp | 1540588 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641690890 |
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| Product | integrase family protein |
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| Protein accession | YP_001818134 |
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| Protein GI | 182413068 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.447999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTGCG TCTGGAGACA TCCCAAGAGC CCATTCTGGT TCGCCCGTTT TAAGGCGTCG
CCGGGCGTCT TCGTCAACCG CTCGACCAAG GAGACGAATC GCAAAAAGGC CGAAGAGGTC
GCCCGGTCCT ACGAAGAAGC CGGGCAAAGG TTGGGACGCG GGGAGCATCA CATGCGCGTG
ATTCGCGACG TTGCCGCGAA ATACTTCGAG AACACCGCGG CGGATGTGTC GTTCAAGACC
TACACGGATA TCTGGCTGAA GCGGAAGGCG ACCGAGGAAG TGAGCCCGGG CACCCTCACC
CGCTATCGCC AGATCGCGGA GGCGATGGGA GAGTTTCTGG GACCACGGAT CGAACGAAAC
CTGGTTTTTC TCAGTGCGAT TGAGGTCCAG ACGTTCCGTG ACTTGATCGG AGCGCGCCTG
AGCGCGAAAA GTGCGAACAT CTACCTTAAG ACGCTCCGCA TCCTGCTGGG CGAAGCGTGG
CGCGACGGTC ACGTGATCGA GAATGTCGCC AACAAAGTTA AGACGTTGAA AGTGCGCGAA
AATCAAACCG CGCGCCGTCC CTTCACCACG ACGCAGATCG AGATCCTATT GAGCCACGCG
CCGGGTGAGT GGAAAGGGAT AATCCTTTTC GGCTTCTACA CCGCCCAGCG ACTCGGGGAT
ATTGCGAGTT TGTCCTGGAG CCAAGTGGAC CTCGAAAAGG CGGTGGTTCA TTTCAAAACG
GCGAAAACGC ATCGCACCGT TGAAGTGCCC CTTGCTGACC CGCTGCTCGC TTTTCTCAAA
CGCCTACCCG CACCTGAGCG AGCCACCGCT CCCGTCTTTC CCAAAGCCCA CGCGATTGTC
ACCAAGGAAG GGCGGACCGG ATCACTCTCG AATCAGTTCC ACGAGATTCT CACCGCAGCC
AAACTCGCCG AGAAACGCAC GCACCATGCC GACGCGAAGG CGCCGACCGG GCGCAGCGGC
AAGCGTCAGA CCAGTGCGCT CTCGTTTCAC TCGTTGCGCC ATTCCGCAAC CAGCGCTCTG
AAGCGCGAAG GCGTCAATGA CGCGACCGCG CGGGACATCG TCGGCCACGA GTCCCGGGCG
ATTTCGGAGC ACTACACGCA CATCGACACC GAAACGAAGC GACGGGCCAT CGCGAAACTG
CCGGTCTTGA TCCAACCGGA CCAATAG
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| Protein sequence | MACVWRHPKS PFWFARFKAS PGVFVNRSTK ETNRKKAEEV ARSYEEAGQR LGRGEHHMRV
IRDVAAKYFE NTAADVSFKT YTDIWLKRKA TEEVSPGTLT RYRQIAEAMG EFLGPRIERN
LVFLSAIEVQ TFRDLIGARL SAKSANIYLK TLRILLGEAW RDGHVIENVA NKVKTLKVRE
NQTARRPFTT TQIEILLSHA PGEWKGIILF GFYTAQRLGD IASLSWSQVD LEKAVVHFKT
AKTHRTVEVP LADPLLAFLK RLPAPERATA PVFPKAHAIV TKEGRTGSLS NQFHEILTAA
KLAEKRTHHA DAKAPTGRSG KRQTSALSFH SLRHSATSAL KREGVNDATA RDIVGHESRA
ISEHYTHIDT ETKRRAIAKL PVLIQPDQ
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