| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1220 |
|---|
| Symbol | |
|---|
| ID | 6206312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 1515281 |
|---|
| End bp | 1515769 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641690862 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001818106 |
|---|
| Protein GI | 182413040 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.583537 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGATT GTTGCTTAAC GAAAGGTGAC GAGTGCTCGT CCGAGAAGGA GTCGGCTGCC
AAGCCGTCCT GCCCGCGCTG CGGGCACGCC GGTCGCCCGG TCTCGACGCT CACGCTCAAG
CACCAAGTTA AGTCCCAGTT TTTGCCGGCC GTAAATGCCG GGGGATTTCA CTTCTGCCCC
ACACCCGACT GCCCGGTCGT CTATTTCAGC GCCGGTGGTT CAGTTCTCAC AACGGGCGAC
GTTCGCCGTC CGGTCACTCA AAAAGATCCC GCGCAGGCAC CGGTGTGTTA TTGCTTCGGC
TTCACGCCCG CGATGATCCG TGACGAACTT GCCGCCACAG GAAAATCCAC CGTGATCGAA
CGCATCGCGG CGGAGATGAA GGCTGATTTT TGCGCTTGTG AGATTCGCAA TCCCCAAGGC
TCCTGCTGCC TCGGCAACGT GAAAGCTGCC GTCAAGGCCG CCACCGCAGA GCGCGCCGGT
CTTGCCTGA
|
|---|
| Protein sequence | MSDCCLTKGD ECSSEKESAA KPSCPRCGHA GRPVSTLTLK HQVKSQFLPA VNAGGFHFCP
TPDCPVVYFS AGGSVLTTGD VRRPVTQKDP AQAPVCYCFG FTPAMIRDEL AATGKSTVIE
RIAAEMKADF CACEIRNPQG SCCLGNVKAA VKAATAERAG LA
|
|---|
| |