Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1217 |
Symbol | |
ID | 6207338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1513225 |
End bp | 1514235 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641690859 |
Product | integrase family protein |
Protein accession | YP_001818103 |
Protein GI | 182413037 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCCC CCGACCTTCC ATCTCTGATC CGCGGGTTTT TCGATCAGCA TCTCGTGTCC CAGCGCGGAC TGAGTGGCCA CACGGTTCTG TCGTATCGCG ACACCTTCAA GCTCCTCCTC AAGTTCGCTT CCGACGACTC GGGCAAGCGC GTGACCGAGC TCACCCTGGC CGATCTCACC GCGGAGTTGG TGCACGGCTT TCTTCGCCAT CTCGAAGCGG ACCGGCGCAA CGGGATCGTC ACCCGCAATC TTCGGCTGGC CGCGATCCAT TCTTTCTTCC GCTACCTCGC GATCGTTGAT CCCCGGCACC TGACCCACGC CCACACGATC ATCGCGGTGC CGTTCAAACG GCGACCGCAT CGCGTCGCGC AGTTTCTGGA GAAGGATGAG GTGCAGGAGA TATTTCGTCA GATCGATTCC CGGACGCTGT TCGGTCAGCG CGACGACGCA CTCTTACGGA TGCTCTACAA CACCGGCATG CGCGCGCAGG AGTTGGTTGA CCTCGACGTG CGGCACGTGC GTTTCACTCG ACCGTCGAAC GTGCTCATCT TCGGCAAGGG CCGCAAGGAG CGCACCTGCC CGTTGTGGCC CGAGACGGTC GCCGCGCTGA AGAGTTATCT CCAGCCTCGT TCGATCAAGT TCACCGACGC CGTGCCGCTG TTTCTCAACA TCGACGGCAA CCGGCTGACG CGCTTCGGCG TTCGCTACAT TGTCAGTCAC CGCATCAGTG AGGCGGCCCA GCGCTGCCCG ACCTTGCTCG CGCGGCGGAT CACTCCGCAC ACGTGGCGCC ACACGACGGC GATGCATTTG CTGCAATCGA ACGTCGACCT CGCGATGATC CGTTCCTGGC TCGGGCATGC ATCGATCGAG ACCACCAACA CCTACGTCGA GATCGATCTT GAGATGAAGC GCAAGGCTCT CGCCTCCGCC GAGAAGATTC TCCCGAAGCC GAAGCACCCG TCGTCATGGC GCGCCAACAC CGACGTGCTC GCCTGGCTGT CCAGCCTCTA A
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Protein sequence | MSAPDLPSLI RGFFDQHLVS QRGLSGHTVL SYRDTFKLLL KFASDDSGKR VTELTLADLT AELVHGFLRH LEADRRNGIV TRNLRLAAIH SFFRYLAIVD PRHLTHAHTI IAVPFKRRPH RVAQFLEKDE VQEIFRQIDS RTLFGQRDDA LLRMLYNTGM RAQELVDLDV RHVRFTRPSN VLIFGKGRKE RTCPLWPETV AALKSYLQPR SIKFTDAVPL FLNIDGNRLT RFGVRYIVSH RISEAAQRCP TLLARRITPH TWRHTTAMHL LQSNVDLAMI RSWLGHASIE TTNTYVEIDL EMKRKALASA EKILPKPKHP SSWRANTDVL AWLSSL
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