| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1140 |
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| Symbol | |
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| ID | 6205374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1425502 |
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| End bp | 1426650 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641690783 |
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| Product | putative DNA topoisomerase I |
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| Protein accession | YP_001818028 |
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| Protein GI | 182412962 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3569] Topoisomerase IB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.59923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAAATC GTTCTTCGCC GGCTCCCGCT CCGGACGCCA TCGCCTCCGC GCGCGAGGCG
GGGTTGCGTT ACGTCAGCGA CGAGTCGCCG GGCATCACGC GCAAACTGGC CGGCAAACGC
GCGCGGTACC TCGATCCGCA GGGACGCGCC ATCAAGGATC CCGCCACGCT CGCGCGGATC
AAGCGGCTGG CGATTCCGCC GGCATGGAGC GAGGTGTGGA TTTGCCCGCT GGCGAACGGG
CACATCCAGG CCACCGGCCG TGATGCGCGG CGTCGGAAGC AATACCGCTA TCATCCCGAT
TGGTCGTCGG TGCGCGATGG CGCGAAGTTC GAGCGCACGA TCGCCTTCGG GCGGGCGCTG
CCGAAAATCC GCCAGCACGT CGCCCGCGAT CTCGCGCGGC GCCGCCTCGA CCGCCGCAAG
GTGCTCGCGG CGATGGTGCG ATTGCTCGAG TCGACCTTGG TGAGAATCGG CAACGAGGAA
TATGCGAAAC AGAATCGCTC CTTCGGGCTG AGCACGATGC GCGATCGGCA CGTGCGGATC
GGACGGGGAA CGCTGCACTT CGAGTTTCGC GGCAAGAGCG GCAAGAACCA CCAGATCGAC
CTGCACGATC CGCGACTCGC CGAGATCGTG CGACGCACGC AGGAACTGCC GGGCCAGGAT
CTCTTTCAAT ATGTGGACGA CGACGGCGAG CCGCAAAAGA TCGGGTCCGC CGACGTGAAC
GAGTATTTGC GCGAGATTGC GGGCGAGGAG TTTTCGGCGA AGGATTTCCG CACGTGGGCG
GGCACGGTGC TCGCCGCGCT GGCGTTGCGG GAATTGGGCC CGTTCGCGAC CAAGGCGGAG
GCGAAGCGGA ATCTTGTGCA GGCGATCGAG CGCGTGTCGG GCCGGCTGGG CAATACTCCG
GCGGTCTGCA AGAAATGCTA CGTGCACCCC GTCGTGCTGC AGAGCTACCT CGACGGCGTC
ACGCTGGAGC AGGTGAAAGC CAAAGCGGGC GCGGTGCTGG CTTCCGCCGG GCGGAACGGC
AACGCAGGGT TGAGCGCGGA GGAGAAGGCG GTGCTGGCGT TCCTGCAGCG CAAGTTGCCG
ACCACGGCGG AGCGCCTAGC GAAGTCGATC CGGCAGGAAG CACGCAAACG CGGGCGCGGG
TCCCGCTGA
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| Protein sequence | MENRSSPAPA PDAIASAREA GLRYVSDESP GITRKLAGKR ARYLDPQGRA IKDPATLARI
KRLAIPPAWS EVWICPLANG HIQATGRDAR RRKQYRYHPD WSSVRDGAKF ERTIAFGRAL
PKIRQHVARD LARRRLDRRK VLAAMVRLLE STLVRIGNEE YAKQNRSFGL STMRDRHVRI
GRGTLHFEFR GKSGKNHQID LHDPRLAEIV RRTQELPGQD LFQYVDDDGE PQKIGSADVN
EYLREIAGEE FSAKDFRTWA GTVLAALALR ELGPFATKAE AKRNLVQAIE RVSGRLGNTP
AVCKKCYVHP VVLQSYLDGV TLEQVKAKAG AVLASAGRNG NAGLSAEEKA VLAFLQRKLP
TTAERLAKSI RQEARKRGRG SR
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