Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1086 |
Symbol | |
ID | 6204490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1343820 |
End bp | 1344971 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641690729 |
Product | anticodon nuclease |
Protein accession | YP_001817974 |
Protein GI | 182412908 |
COG category | [S] Function unknown |
COG ID | [COG4694] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.028273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCACG AAGACATCGC AAAAAAGGTC AGGGATGCGA AAGAAAAGAT CGTCCTGATC TACGCTTTCA ACGCCACCGG CAAGACTAGG CTATCTCTAG CCTACAAAGA CGCCACGAAA GCTAAGGACG GCAGGCATGC TGGGGTCTAC TACAACGCAT TCAGCGAAGA CCTTTTCGTT TGGGACAACG ACGGCGTCCT GTTGGATATC CGCGAAAGCA GCCTCAACCG GTTTCACGGC TCACTTTCTG AGGACGACAT TCGCGAAAAA CTGAACCGCT ATCGTCCAAG CTACCGGTTT GAGTTCATCC CATATCCCGA CCCTGAAGAC GGCATTAAGT CCGTGCTCTT CTTCTACGAG AAGGCAGCAG AGAACGACCC TAGCAACATC TCGAAGGTGC CGATCAAGAT CTCCCGGGGT GAAGAGCGAG TCTTTGTCTG GTGCTTCTTT TTGGCGCTCT TCGAGGTCGA GGGATGGGCC GACAAACAAT CATCGCATTT CTTCATCGAT GACCCGGTTT CGAGTTTGGA TGACCACAAC ATTTTCATCA CAGCCTCGAC CCTATTCGAC TTAATCGAAG AGCATTCCGA GAAGCGGAAG TTCATCATCA CGACTCACCA CATTGGGCTG TTCTCGATTC TGGCAGATTG GCTAACCAAA GGCGATAAGG CCGGCTCCTT CAAGAAGCGG ACCAAGCTCT ATACGCTGAA CAAAGTAGAC GGTGAGCCCT TGCTCGAAAA CTGCGAGAAC TCCGTCTTTC TCTATCATTT GCGCCTGCTT CAACAACTCG ATCATGCGCA TGCGAACAAT GCGGTGAAAT CATTTCACTT CGCTCTGCTT CGCCAAGTCC TAGAGAACGT AGCATCATTT TTGGGCGTCA GTCAGTTCGG CTACGTGTTG GAGCAGGTTG GAATCACGGA TCCTGAAGAG GCAGCCAACA TCATCAACAC GCTTTCCCAC AAGAAGGTCT ATTACTTCGA GAGCGACGAA CTCACGCCGG ACAGTAAGGC GCTTTTCGAA AACGTCTTCA CCAGGATCAA GGCGAAATAC AACTTTGTGC TCCACACACC GGCTACGACG GCCCCCGCTC CTGCCGCTGC AGAGGCTCCA TCGAGTGCTC CGATGGCTGC ACTCGTCAAA TCCGCTTCAT GA
|
Protein sequence | MTHEDIAKKV RDAKEKIVLI YAFNATGKTR LSLAYKDATK AKDGRHAGVY YNAFSEDLFV WDNDGVLLDI RESSLNRFHG SLSEDDIREK LNRYRPSYRF EFIPYPDPED GIKSVLFFYE KAAENDPSNI SKVPIKISRG EERVFVWCFF LALFEVEGWA DKQSSHFFID DPVSSLDDHN IFITASTLFD LIEEHSEKRK FIITTHHIGL FSILADWLTK GDKAGSFKKR TKLYTLNKVD GEPLLENCEN SVFLYHLRLL QQLDHAHANN AVKSFHFALL RQVLENVASF LGVSQFGYVL EQVGITDPEE AANIINTLSH KKVYYFESDE LTPDSKALFE NVFTRIKAKY NFVLHTPATT APAPAAAEAP SSAPMAALVK SAS
|
| |