| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1045 |
|---|
| Symbol | |
|---|
| ID | 6206486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1299888 |
|---|
| End bp | 1301864 |
|---|
| Gene Length | 1977 bp |
|---|
| Protein Length | 658 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641690669 |
|---|
| Product | NAD+ synthetase |
|---|
| Protein accession | YP_001817933 |
|---|
| Protein GI | 182412867 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.700176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTA TCAAAGTTGC AGCCGGAATC CTCAACCAGA CGCCCTTGGA TTGGGACAGC
AATCGAGCGA ACATTATCAC TGCCATCAGA CAGGCACGAG AGACAGGAGT TGGCGTCCTC
TGCTTACCAG AACTGTGCAT CTCGGGCTAT GGTTGCGAGG ATGCGTTTCA CGCGCCGTTC
GTTCACCAAA CCGCTTGGAC GGAACTCAAC ATTATCGCGG GTGAGACGAC GGGCATGGCG
GTGGCGGTTG GTCTCCCTGT CATGCACCAG AACTCCGTGT TCAATTGTGC CTGTCTGCTG
GTGGACGGCG TCATCGCGGG TTTTGTGGCG AAGAAGTTTC TGGCCGGAGA CGGCATCCAC
TACGAACCGC GATGGTTCAA ACCTTGGCCA AGCGGTGTTC AGCATGAACT GCGCGTGGAC
GGCCGGAGTT ACCCGTTCGG CGATGTGTTT TTCGATCTCG ATGGCCTTCG GATCGGCTTC
GAGATCTGCG AAGACGCTTG GGTGGCCAAC AGACCCGGCG CGTCGTTGGC ATCGAAGGGC
GTGGACGTGA TCTTCAACCC AAGTGCGAGT CACTTTGCGT TCGGGAAGCT CGACGTCCGC
AAGCGTTTCG TGCTCGAAGG ATCGAGAGCT TTCGGAGCGA CGTATGTGTA TTCGAATCAT
GTGGGCAACG AGGCGGGCCG CGCGATCTAC GACGGCGGTG CGCTGATTGC ATCTGGCGGC
AAGCTCGTCG CCGCTGGTCC ACGTTTTTCA TTCCAGGGCG TCACGGTCAC GTCCGCCGTT
GTTGATATTC AGCAGACGCG CCTGAGCCAG GCTCGGACCA CGAGTCACCA ACCTGGCCTC
ACATCGTCCG ATGCCGGCTG CGTTCGACTC AAGTTCGCCG TGCCGGCTAC TGCGTTTGAA
CCCGCCAAGA TCGTCATGGC CCCTTGGGAG AATAGTGCTG AGTTGAAGGC GGAGGAGTTT
GCCCGCGCCG AAGCATTGGC ACTTTTCGAC TACATGCGAA AAAGCCGGTT GCATGGCTTC
GTTGTTTCAT TGAGCGGCGG AGTGGACTCA GCGGCGGTCA CGTGCCTCGC AGGGTTGTCG
GTGCGAATGG GGATCGCGGA ACTCGGACTG AATGGCTTTC TGAAGAAACT CGGCTACGCG
CACGCCCTGC GCGAACATCG GGATGTCGGC AGCGTCATCA GGGCACTCCT CACGTGCGTT
TATCAGGGCA CGGAGAATAG CTCGGCCACT ACTCGCGATG CCGCACGGGC CGTCGCCCAA
GCTGTCGGCG CCGAGTTTTT GGAGTTCGAA GTCGGCGAAC TGGTGGAGCG CTACACCTCC
ATCGTGTCCG GGGCGATCGG TCGTCCGCTC ACTTGGGCAA CCGATGACAT CGCGCTTCAA
AACATCCAGG CGCGGGTGCG AGCTCCCGGC GTTTGGTTTC TCGCCAACCT CCGGAATGCG
CTGCTTCTCT CCACCAGCAA CCGCTCGGAG GCCGCGGTAG GCTACGCAAC GATGGACGGA
GACACGTGCG GCGGCCTGAG CCCGATCGCC GGCATCGACA AAGCCTACCT GCGCCAATGG
CTCGTCTGGA TGGAGCAACA TGGACCTGAC GGTATCGGCG CCCTGCCGGC ATTGAGGCTC
GTGAATGCCC AGGCGCCGAC GGCCGAGCTT CGTCCTGCCG AACAGAAGCA AACGGACGAG
GGTGATTTGA TGCCTTACAC GGTGCTGGAC GCCTGTGAAC GCGCGTTCAT CCGCGACAAG
AAAGGTCCGG CAGAAGTCCT CGCGAGCATC GGGGTTCAGT TTCCTCAGTA TAAGGTCGAC
CAGATGAAAG TTTGGGTGAC GCGGTTCTTC CGGCTTTGGA GTCGCAACCA GTGGAAGCGA
GAGAGGTATG CGCCTTCGTT TCACTTGGAT GACGAGAGCC TCGATCCCAA AACGTGGTGC
CGTTATCCAA TCCTCTCAGG GGGGTTCGCA CGAGAGCTGT CGGAACTGAA CACATGA
|
|---|
| Protein sequence | MKPIKVAAGI LNQTPLDWDS NRANIITAIR QARETGVGVL CLPELCISGY GCEDAFHAPF
VHQTAWTELN IIAGETTGMA VAVGLPVMHQ NSVFNCACLL VDGVIAGFVA KKFLAGDGIH
YEPRWFKPWP SGVQHELRVD GRSYPFGDVF FDLDGLRIGF EICEDAWVAN RPGASLASKG
VDVIFNPSAS HFAFGKLDVR KRFVLEGSRA FGATYVYSNH VGNEAGRAIY DGGALIASGG
KLVAAGPRFS FQGVTVTSAV VDIQQTRLSQ ARTTSHQPGL TSSDAGCVRL KFAVPATAFE
PAKIVMAPWE NSAELKAEEF ARAEALALFD YMRKSRLHGF VVSLSGGVDS AAVTCLAGLS
VRMGIAELGL NGFLKKLGYA HALREHRDVG SVIRALLTCV YQGTENSSAT TRDAARAVAQ
AVGAEFLEFE VGELVERYTS IVSGAIGRPL TWATDDIALQ NIQARVRAPG VWFLANLRNA
LLLSTSNRSE AAVGYATMDG DTCGGLSPIA GIDKAYLRQW LVWMEQHGPD GIGALPALRL
VNAQAPTAEL RPAEQKQTDE GDLMPYTVLD ACERAFIRDK KGPAEVLASI GVQFPQYKVD
QMKVWVTRFF RLWSRNQWKR ERYAPSFHLD DESLDPKTWC RYPILSGGFA RELSELNT
|
|---|
| |