Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0988 |
Symbol | |
ID | 6205346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1214631 |
End bp | 1215284 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641690611 |
Product | DNA repair ATPase |
Protein accession | YP_001817876 |
Protein GI | 182412810 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.382844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00727028 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATCC AACTGCTCGT CGCCGCCTGC GCCGTGGCGC TGCTCGCCGG CTGTTCGTCC GCCTACTACG GCGCGATGGA GAAGTTCGGC ATCGCGAAGC GCGAGATCCT CGTGGATCGC GTCGAGGACA CGCGCGACGC GCAGAACAAG GCCAAGGAGC AGTTCGCCAG CGCACTGGAT CAGTTCCTCG CCGTCACCCG CATCGACGGC GGCGAACTCC AGCGCAAGTA CGATTCTCTT AACCGCGAAT ACCAGCGCAG CGAGGAGCGC GCGAAGGAAG TGCGCGACCG GATTGCCGCG GTCGAGGACG TCGCCGAAGC GTTGTTTCGC GAGTGGAAGC AGGAGCTGAA GCAATACTCG AACGCGACGC TCCGCCGCGA GAGCGAGCGC GAGTTGGACC GCACCCGCGA GCGCTACGAT CAGCTGATCT CGGTCATGCG TCGCGCGGCC GACCGGATGG ACCCCGTGCT CGCGACGTTT CGTGACCAGG TGCTCTTCCT GAAGCATAAC CTGAACGCGC GCGCGCTCGC CTCGCTCACC ACGACCAACC GCGAACTCGA GGCGGACATC ACACGGCTCG TCGCCGACAT GGAGGCGTCG ATCCGTGAAG CGGAGCAGTT CATCCGCAGC ATCCGCGAGA ACGCCACACC GTAA
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Protein sequence | MKIQLLVAAC AVALLAGCSS AYYGAMEKFG IAKREILVDR VEDTRDAQNK AKEQFASALD QFLAVTRIDG GELQRKYDSL NREYQRSEER AKEVRDRIAA VEDVAEALFR EWKQELKQYS NATLRRESER ELDRTRERYD QLISVMRRAA DRMDPVLATF RDQVLFLKHN LNARALASLT TTNRELEADI TRLVADMEAS IREAEQFIRS IRENATP
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