| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0931 |
|---|
| Symbol | |
|---|
| ID | 6205859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1145614 |
|---|
| End bp | 1146120 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641690554 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001817819 |
|---|
| Protein GI | 182412753 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCG AGACGCTCGC TTTCCAAACG TTGCTGGCGG TCGCCCGGCA ACGCGACGGG
CTGGATGAAA GCCGCTGCCG GCTGGTGCTC GAGTTGCTCA GCACCGCGCG GCAGGTTCGG
GCCACGCTGC AGGCGGAAAT GGCGAAGCTC GCGATCACCG AGGTGAAACT GGGCATCCTG
GTCGCGCTGT TCATCCTCGA TCCGGCGCCC GCGACCCCTG CCGACCTGGC GGCCCACACG
AGCGGGACCC GCTCGGCGGT GACCGAGGCG CTCGACCAGC TTGCGGCGGC TGGTCTCGTG
CAGCGCGAGC GGGACACCGG CGATCGACGC GTGATTCATG TGCACCTGAC GCCAAAGGGC
CGCGGCGCGG CGGACGAGGC GATCGGCCGG TTTCTCGCCC GGATCGGCGA GATCGCCCGC
GACGTCGATC TGGCTTCCGA AGAGCCAGTT TTGGCCGCCT GCGCGCAACT GAACGCCGGT
GCCATGCGGA TCTCGCCTTC CCGGTAG
|
|---|
| Protein sequence | MDRETLAFQT LLAVARQRDG LDESRCRLVL ELLSTARQVR ATLQAEMAKL AITEVKLGIL
VALFILDPAP ATPADLAAHT SGTRSAVTEA LDQLAAAGLV QRERDTGDRR VIHVHLTPKG
RGAADEAIGR FLARIGEIAR DVDLASEEPV LAACAQLNAG AMRISPSR
|
|---|
| |