Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0927 |
Symbol | |
ID | 6207854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1139024 |
End bp | 1139932 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641690550 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001817815 |
Protein GI | 182412749 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGC GCCACCTCCG CTATTTCAAG GCGGTCGCCG AGCAGCTGAA CTTCAGCCGG GCGGCGGAGC AGTTGCGCAT CGCGCAACCG GCGCTCAGCC GGCAGATCCG CGATCTCGAA CACGAACTCG GCGCGCGGTT GCTCGATCGC AATCGCGTCC GCGTGCAGCT CACGGATGCC GGCCGCACAT TCTACGCCCA CACGTGCAAG ATCCTCGCGC AGCTCGACGT CGCGGTGGCG TCGGTCGAGG AAACGCTCGC CGGTGCGAGC GGTGAGCTGA TCATCTGCAA CGACTGGCGG CTCTCCAACC GCTATGTGCT CGGCGCGATT GCGGAATTTC GCGGTCGGTA TCCACGGGTC GACGTGGCCC TGCGCGACCT GCACATCCAC GAACAGCTCA CGGCGCTCCG CACCCGGCAG GCGCACCTGG GCTTCGTCGT CGCGCGGGAA TTCGCGCATC ATGACGACCT GCAGTCGCTG AGCCTGCTCA CCTCCGAACT GATGGTTGCT GTAGGCGCGC AACATCGGCT CGCGGGCGCC ACCCACGTGC GGATGGCGGA TCTCGCCGGG GAGACCTGGG TCACCACCGG CCCGAAGGAT TCGCCCGGGC TGCGCGAGTT CATCACGCAA CGCTGCCGAG TCAGCGGGTT CACGCCCACG TTCGCCCGTC CGGTGCATTC GCTGGATAGC GTGCTCGCGC GCGTGGCCAC CGGCTATGGC GTGTGCCTGC TCCCGGATTT CCTGGCCGGC ACCTTGTCGG CGGGTCCGCT GGTGCGTTTC CTTCGTTCCG ACTGCCCGCC GATCGAGCTG CAGGCAGTAT GGCACCGCAC CGAAGAGTCC CGGCTGCTCC ACCAGTTTCT GGATATCCTG CGCCGCCAGA TTGCCGCGCC TCCGGCCTCG GCGAGTTGA
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Protein sequence | MELRHLRYFK AVAEQLNFSR AAEQLRIAQP ALSRQIRDLE HELGARLLDR NRVRVQLTDA GRTFYAHTCK ILAQLDVAVA SVEETLAGAS GELIICNDWR LSNRYVLGAI AEFRGRYPRV DVALRDLHIH EQLTALRTRQ AHLGFVVARE FAHHDDLQSL SLLTSELMVA VGAQHRLAGA THVRMADLAG ETWVTTGPKD SPGLREFITQ RCRVSGFTPT FARPVHSLDS VLARVATGYG VCLLPDFLAG TLSAGPLVRF LRSDCPPIEL QAVWHRTEES RLLHQFLDIL RRQIAAPPAS AS
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