Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0789 |
Symbol | |
ID | 6208679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 962672 |
End bp | 964969 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641690412 |
Product | hypothetical protein |
Protein accession | YP_001817677 |
Protein GI | 182412611 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTTTGC GCACCCGGCC AGTTCGTTTC CTGATCACTC GCATCGCGCG AGCCTACGGG TTTCTCGACC CGGTGGCTCT GCTTGCGAGC TTGCGCGGCT TTGCCAAACC CTCCGAAGTC GCTGAGCCGA TCGAGTTGCT GCGCGCCGGC ATGCTGTTCC ATGCGCGCGG GCTGGTGAAC ACGAAGGCGA TCCAGAACAA TCTCGACTGG GTGTGGCCCT ACTGGGTCGA GCGGCAGTTC AATCCGGCCG ATCCGTCGTT CATTCCGCGG GCGTTTTCTT TCAGCCACAT CAATCTCACG CACCGCAACT GGACCGCCGT GGGCCGACCC GACGTCCCGT TCTATCCGAT CGTCGATCCG CGCGGGCTGG TGACGCCGCT GTTCGATGGC TGGTCGCTGG ATTTTTGGTT TGTGCCGGAG GAGGGACCGC TGCTGCTGCC TTCCAAGCTC AGCCGCGTCG AACAAACGCT GTCGCTCGAG CAGAACCTCC AGGTGCGCAC GATCGTCGGC GACGCGGCGT TCGATCCCGC GGATCCGGCC ACCGACGGGG TTGGTCTCGA GAGCTGCGTT ACGCTCGAGC TCGAGCGCGG GCAGCCGCAT TGCACGATTC ACGTCCGCAC GCTCAGTCGC CGGCCGGGGG CGATCGCGGT GGCGTTGCGG CCCTACAATC CCGAGGGCGT CAGCTTCATC AAGGACATCG CGGTCGCTCC GGACTGGCCG GGGTGGCTGA TCAATCACCG GCACGAGGTG CGGTTCGATC GCGCGCCCGA GCGCCATCTG CTTTCCACCT ACGCGGCGGG CGATGTGCTG CTGCGGCTGC GCGAGAGCTT CACGGCGCAG CGCGTCACTT GCCCGGTCAG CATGGCCACC GCCGTTGCCT TGTTTTCCAC CGGAGCCGAC GGCCACGGCT CGAGCCGTAT CCGGGTGCCG ATTTTCGACG AACTTGAGCC GCGGCAGCGA CCGGTGATCC GGAATTCGCA ATCGTGGAGC GAGGCGGTGG CGCCGCTCGC GCGGTTGACG ATCAACGAAC CACGGCTGCA GCGGCTCTAC GACCTGGCGG TTGCCAACGT CGTGTTGCAC GCGCCGGGGG AAGTTTATCC CGGACCCTAC ACATACAAGC GCTTTTGGTT CCGCGACGCC GTGTTCGTGC TCAACGCGCT GCTCTCGCTC GGCGCGGTCG AGCGCACGCG GCGGGCGCTG CGCGAGTTCG CCCCTCGCCA GCGGCTCGAC GGTTACTTCC TCTCGCAGGA AGGCGAGTGG GACAGCAACG GCGAAGCATT GTGGTTTTAT CACCGCTTCG CCGCGCTGAC CGGCGAATCA CTCCCCGCCG ACTGGCTGCA CGCCGTCGCG AAAGGCGCGC GGTGGATTCA CCGCAAGCGG CTGCCGCTCA CGCCGCCGCG GCTCGAAGCC GGGCTGCTGC CGGCCGGATT CAGCGCCGAG CATCTCGGAC CGAACGACTA TTATTATTGG GATGACTTCT GGGCAGTCGG TGGGCTGCGG GCCGCGGCCG AGCTGCTGCG CGCCACGGAT CCGGCGGACG CGACCGAGTG CGCGCGCGAG GCCGACGAGT TCCTCGAGAC CATCCGCCGT TCGTTTCCCG CCGGTCCGCA CCGCCGGTTT CCGGGCGCGA TTCCGGCGTC GCCGCATCGC CGGATGGACT CCGGCTCGGT TGGCTCGCTC GTGGCGGACT ATCCGCTGCA GCTCTTCGCG CCCGGCGACC GCTCGATCGC AAAGACGGCG GACTACCTGT GCAACGAGTG CCTGCACGAC GGTGGTTTTT TCCAAAACAT GATTCATTCC GGCATCAACG CCTACCTGAC GCTGCATCTC GCGCAGGTGC GGCTGCGCGC CGGCAAACCG CAGGCGGCGT GGGCCTTGAT CGACCGCGTG GCCGAGCTCG CCTCGCCGAC CGGGCAGTGG CCCGAGGCGA TTCATCCGCT CACGCTCGGC GGCTGCATGG GTGACGGCCA GCATATTTGG GCCGCCGCGG AATGGTTGAT GATGATCCGG CATCTTTTCG TGCGGGAGGA AGCCGGCACG CTCGTGATCG GCGCCGGGTT GCGGCCGGAA TGGTGGCGGG ACGCGGAGGC GGCGTTCGGG CCTACGCTGA CCCCGTATGG CGCCGTCAGG GTACGGATCA GCGCCCAGGA CGCCGGCGCC CGCGTGCAGC TCGACGCCGC CTGGCGCGGC GGTGCGCCGG CGCTCGAATT CCACCTGCCC GGCTGCGCAC CGCTGTCGCT CCCGCCCGGC GAGCAGCGAA ATGAATTCAT CCTGACCCGG AACGGAGGCC AGCCATGA
|
Protein sequence | MILRTRPVRF LITRIARAYG FLDPVALLAS LRGFAKPSEV AEPIELLRAG MLFHARGLVN TKAIQNNLDW VWPYWVERQF NPADPSFIPR AFSFSHINLT HRNWTAVGRP DVPFYPIVDP RGLVTPLFDG WSLDFWFVPE EGPLLLPSKL SRVEQTLSLE QNLQVRTIVG DAAFDPADPA TDGVGLESCV TLELERGQPH CTIHVRTLSR RPGAIAVALR PYNPEGVSFI KDIAVAPDWP GWLINHRHEV RFDRAPERHL LSTYAAGDVL LRLRESFTAQ RVTCPVSMAT AVALFSTGAD GHGSSRIRVP IFDELEPRQR PVIRNSQSWS EAVAPLARLT INEPRLQRLY DLAVANVVLH APGEVYPGPY TYKRFWFRDA VFVLNALLSL GAVERTRRAL REFAPRQRLD GYFLSQEGEW DSNGEALWFY HRFAALTGES LPADWLHAVA KGARWIHRKR LPLTPPRLEA GLLPAGFSAE HLGPNDYYYW DDFWAVGGLR AAAELLRATD PADATECARE ADEFLETIRR SFPAGPHRRF PGAIPASPHR RMDSGSVGSL VADYPLQLFA PGDRSIAKTA DYLCNECLHD GGFFQNMIHS GINAYLTLHL AQVRLRAGKP QAAWALIDRV AELASPTGQW PEAIHPLTLG GCMGDGQHIW AAAEWLMMIR HLFVREEAGT LVIGAGLRPE WWRDAEAAFG PTLTPYGAVR VRISAQDAGA RVQLDAAWRG GAPALEFHLP GCAPLSLPPG EQRNEFILTR NGGQP
|
| |