| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0748 |
|---|
| Symbol | |
|---|
| ID | 6206543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 915646 |
|---|
| End bp | 916197 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641690372 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_001817637 |
|---|
| Protein GI | 182412571 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.492726 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCTTT TCACTGCCAT TCGCGACGTC CTTTCCGGTT TCAAAAGCCT GCTGATCGGC
ATGCGGATCA CCGGCCGCGA GGCCGCGAAA CCGATCCTCA CCGTTCAGTA TCCGCGCGAG
ACGCTGAAGA TGCCCGCGCG CTTCCGCGGC CACATCCAGC TGATCCTCGA TCCGGAAACC
GGCAAGCCGC GCTGCACCGC GTGTACGCTG TGCGAGAAAG CCTGCCCGAG CGAGTGCATC
GACCTCGACG GCCTCCGCCG CGAAGGCGAC AAGAAGAAGT CGGTCTCGAA ATACATGCTC
GATTTCACGA AGTGCAGCCT CTGCGGCTCC TGCGTGGAAG TCTGCCCGAG CGACGCGATC
GAGTTTTCCA AGCAATACAA CGTCGTCAGC CTCGGCCGCG AGCAGTTCGC CCAGATGGAT
CTCTACGCGA AAGTTGAAGC CGAGGCGCAA GCCTGGGCCG CCGCGCATCC GACCCCGCCG
GCGCCGCCGA CCCCGGCGAC ACCGCAGCCC GCCGTCACTC CCGCGGCCAG CATCGCGCCG
AAAGCCTCAT GA
|
|---|
| Protein sequence | MGLFTAIRDV LSGFKSLLIG MRITGREAAK PILTVQYPRE TLKMPARFRG HIQLILDPET
GKPRCTACTL CEKACPSECI DLDGLRREGD KKKSVSKYML DFTKCSLCGS CVEVCPSDAI
EFSKQYNVVS LGREQFAQMD LYAKVEAEAQ AWAAAHPTPP APPTPATPQP AVTPAASIAP
KAS
|
|---|
| |