| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0679 |
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| Symbol | |
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| ID | 6207550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 831940 |
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| End bp | 835227 |
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| Gene Length | 3288 bp |
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| Protein Length | 1095 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641690302 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_001817568 |
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| Protein GI | 182412502 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAC GCTCCGACCT TCAATCCGTC CTGATCATTG GTGCCGGTCC CATCGTGATT
GGTCAGGCTT GCGAGTTCGA CTACTCGGGC ACGCAGGCTT GCAAAGCGCT GAAGGAGGAG
GGCTACCGCG TGATTCTGGT GAATTCGAAT CCGGCCACGA TCATGACGGA CCCCGAGTTC
GCCGACGTGA CCTACATCGA GCCGCTGACC GTCGAGGTTT TGGAGAAAAT CATCGCCACG
GAGCGGCCTT CGGCGCTGCT GCCCACACTC GGCGGGCAGA CGGCGCTGAA CCTGTCAATG
GACCTGCACC GGACGGGTGT GCTTGCGCGT TACGGGGTCG AGATGATTGG GGCAAAGCCT
GAAGCGATCG CGAAAGGCGA AGATCGCGAG TTGTTCAAGC AGGCGATGCT GAAGATCGGC
CTCGACGTGG CGAAATCACG TACCGTCCGC TCGATGGCCG AGGCGCGCGA GGCCGCCGAG
GAGCTGGCGA TGTTTCCGCT GATCATCCGG CCCTCGTTCA CCCTGGGCGG CAGTGGTGGC
GGAATTGCCT ATAACAAGGA GGAATTCGAG CGGATTGTGG CCAACGGGCT TGATCTCTCG
CCCGTGCATG AGGTGCTCGT CGAAGAGTGC CTGCTCGGCT GGAAGGAATT CGAGATGGAG
GTGATGCGCG ATCACAAGGA TCAGTGCGTT GTGATCTGCT CGATCGAGAA CTTCGATCCG
ATGGGCGTGC ATACCGGCGA CTCGATCACG GTTGCCCCCG CAATGACGCT CACCGACAAG
GAGTATCAGG TCATGCGCGA CGCATCGTTC GCGGTCATCC GCGAGATCGG CGTCGAGACG
GGCGGCTCGA ACATCCAGTT CTCCGTCGAC CCGGTGACGG GCCGGATGGT GGTCATCGAG
ATGAATCCCC GCGTGTCGCG GTCCTCCGCG CTCGCATCGA AGGCGACGGG GTTTCCCATT
GCGAAAATCG CCGCCAAGCT GGCCGTGGGC TACGCGCTCG ACGAACTGCG CAACGACATC
ACGCGGCTCA CACCCGCTAG CTTCGAGCCG ACGATCGACT ACGTCGTCAC GAAGATTCCG
CGCTTCACGT TCGAGAAATT TCCCGATGCC GACGCGACGC TGACGTCCGC GATGAAATCG
GTGGGCGAGG CGATGGCGAT TGGGCGGACG TTCAAGGAGT CGTTCCAAAA ATGCCTGCGT
TCGCTCGAGG TCGGCGCCCG CGGTTTCGGT GGCGGCGGCA AGTATGCGAG CGACGATCCG
GTGCCGGAGG ATGTGATCAA CGCGAAGCTG GGCACCCCGA ACGCCGAGCG CGTGCACTAC
CTCCGGTACG CGTTTCGCGC TGGCTACAGC GTCGAGCGGA TTTTCGAGCT CACGAAGATC
GATCCGTGGT TCCTCCACCA GCTGCGGGAA ATCCACGAAA TGGAAACGGA GCTGAGGAAA
TACCGGCTCA GTGCCGAAAG CTGCGGGTCC GCATCGGACG TCGCCGCCGC GGATGCGCGG
CCGCCGCTTC CAACGACGCT CTTCCGCCGG GCCAAGCAGT TCGGCTTCTC CGATGCCCAG
CTGGCGCATT TTTTGAACAC GGATCTGGGT AGCGTGCGCC GTGCGCGCAA GGAGCGCCAG
ATCCACACCA CCTACCGGTT GGTCGACACC TGCGCCGCGG AGTTCGAGGC CTTCACGCCG
TATTACTATT CAAGTTACGG CGAGGAGAAC GAAATCATCC CGTCCGCGCG GAAAAAGATC
ATGATCCTCG GCGGTGGGCC GAACCGGATC GGACAAGGCA TCGAGTTCGA CTACTGCTGC
GTGCACGCGA GCTTCGCGTT GCGTGAAGCC GGTTACGAGA CGGTGATGGT GAACTCGAAT
CCCGAGACCG TTTCCACCGA CTACGACACG AGCGATCGGC TGTATTTCGA GCCGCTCACG
CTCGAGGACG TGATCGAGAT CTATCAGCAG GAAAAATGCG ACGGCGTGAT CGTGCAGTTC
GGCGGACAGA CGCCGCTCAA TCTCGCTGCG GCGCTGAAGG CGAACGGTGC GAACATCATC
GGCACGTCGC CGGAAAGCAT CGAGGTGGCC GAGGATCGGA AGCTCTTTGC GGCCATTCTG
AACAAAATCG GGCTGCGACA ACCGGCGAAC CGCACGGCGC TGAGCGAAGC CGAAGCGCTC
ACGTTTGCGC ATGAAGTCGG CTTTCCCGTG CTGCTGCGGC CATCTTTCGT GCTCGGCGGT
CGCGGCATGT TCATCGTCTA CAGCGAAGCC GAGTTCAAGG CGGTGATCCG GCAGGCGTTC
GACGTGATGC CCGGCAAGCC GGTGCTGATC GACAAGTTCC TCGAGGATGC GATCGAACTC
GACGTCGACT GCATCAGCGA CGGCACCACC TCGGTGATCG GCGGGATGCT GGAGCACATC
GAATTCGCCG GCGTGCACTC CGGCGACGCC GCGATGGTGA TGCCGCCCCA TACCCTGCCG
GCCGAAATGC TCGAACGGGT GCGGCAGGCG ACGCACGCGC TCGCGCGCGA GCTCAACGTC
ATCGGATTGA TGAACGTGCA GTTCGCGATC AAGGACGGGG ATCTCTACGT GCTCGAGGTG
AACCCCCGGG CATCCCGAAC CGTGCCGTTT GTCGCGAAGG CGATCGGCGT GCCGCTCGCC
AAGCTGGCGG CGAAAGTGAT GACCGGCGCC AAGCTCGCGG ATCTCGGCTT CACGCGCGAG
CAGACGCCGA AGCACTGGTG CGTCAAAGAG GCGGTCTTTC CGTTCGTGCG TTTTCCCGGC
GCGGCGATCG TGCTCGGCCC TGAGATGCGC TCGACCGGCG AGGTCATGGG CATCGATGCC
GACCTCGGAC TGGCGTTTGC CAAGGCTCAA GCGGCGGCGA AGCCGGGGCT CCCGATCAAG
GGCAACGTCT TCCTCTCGGT GAAAAACGCG GATAAACCCG CGGCCGTTGG GCTCGCCCGC
CGGCTCGAAG CCATGGGCTT CGTGCTCTAT TCGACCAGCG GGACGGCACA GCATCTTGCC
GACGCGGGCA TCGGGGTGAA GCGGCTGGCC AAGATTAACG AAGGTCGTCC GACGGCGGTG
GATATGATCA AGAACGGCCA GATTCAGCTC ATCATCAATA CGCCGGACGG GATGATTCCA
CGGCGCGATG AAAATGCGAT TCGCGCTAGC GCGTATGCCC ATAACGTCTG CATCATGACC
ACGCTGACGA GTGCGAAGGC GGCGGTCGAC GGCATCGAGG CGCTCCGGCA AAAACCGCTC
GGGGTGAAAC CGATTCAGCA GTATCGCGGC AATGTGAGCG TTCGCTGA
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| Protein sequence | MPKRSDLQSV LIIGAGPIVI GQACEFDYSG TQACKALKEE GYRVILVNSN PATIMTDPEF
ADVTYIEPLT VEVLEKIIAT ERPSALLPTL GGQTALNLSM DLHRTGVLAR YGVEMIGAKP
EAIAKGEDRE LFKQAMLKIG LDVAKSRTVR SMAEAREAAE ELAMFPLIIR PSFTLGGSGG
GIAYNKEEFE RIVANGLDLS PVHEVLVEEC LLGWKEFEME VMRDHKDQCV VICSIENFDP
MGVHTGDSIT VAPAMTLTDK EYQVMRDASF AVIREIGVET GGSNIQFSVD PVTGRMVVIE
MNPRVSRSSA LASKATGFPI AKIAAKLAVG YALDELRNDI TRLTPASFEP TIDYVVTKIP
RFTFEKFPDA DATLTSAMKS VGEAMAIGRT FKESFQKCLR SLEVGARGFG GGGKYASDDP
VPEDVINAKL GTPNAERVHY LRYAFRAGYS VERIFELTKI DPWFLHQLRE IHEMETELRK
YRLSAESCGS ASDVAAADAR PPLPTTLFRR AKQFGFSDAQ LAHFLNTDLG SVRRARKERQ
IHTTYRLVDT CAAEFEAFTP YYYSSYGEEN EIIPSARKKI MILGGGPNRI GQGIEFDYCC
VHASFALREA GYETVMVNSN PETVSTDYDT SDRLYFEPLT LEDVIEIYQQ EKCDGVIVQF
GGQTPLNLAA ALKANGANII GTSPESIEVA EDRKLFAAIL NKIGLRQPAN RTALSEAEAL
TFAHEVGFPV LLRPSFVLGG RGMFIVYSEA EFKAVIRQAF DVMPGKPVLI DKFLEDAIEL
DVDCISDGTT SVIGGMLEHI EFAGVHSGDA AMVMPPHTLP AEMLERVRQA THALARELNV
IGLMNVQFAI KDGDLYVLEV NPRASRTVPF VAKAIGVPLA KLAAKVMTGA KLADLGFTRE
QTPKHWCVKE AVFPFVRFPG AAIVLGPEMR STGEVMGIDA DLGLAFAKAQ AAAKPGLPIK
GNVFLSVKNA DKPAAVGLAR RLEAMGFVLY STSGTAQHLA DAGIGVKRLA KINEGRPTAV
DMIKNGQIQL IINTPDGMIP RRDENAIRAS AYAHNVCIMT TLTSAKAAVD GIEALRQKPL
GVKPIQQYRG NVSVR
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