| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0671 |
|---|
| Symbol | |
|---|
| ID | 6205051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 823836 |
|---|
| End bp | 824597 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641690293 |
|---|
| Product | succinate dehydrogenase/fumarate reductase cytochrome b subunit |
|---|
| Protein accession | YP_001817560 |
|---|
| Protein GI | 182412494 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02046] succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCT TCCGCTCTAC CATCGGCCGG AAAATAATCA TGGCCGTCAC TGGTTTGATC
CTGATCGGCT TTGTGATCGG CCACCTTGTG GGCAATCTCC AGGTGTTTTC CGGCCCGGAC
AAGATCAACG GCTACGCGCA TTTCCTGCAA TCCCTCGGGC CCTTGCTGTG GGTGGCGCGG
ATTGGACTGC TGGTGGCGGT GGGCCTGCAC ATCTGGGCCG CGACCGTGCT GACGCTGGAG
AATCACGAGG CGCGGGATGT CGCCTACAAC GTCAAGCACA CCATTCGCGC GACGCTCACC
TCGCGCACGA TGCGTTGGAC CGGCTACATC GTGGCGGCAT TCATTCTCTA TCACTTGGCT
CACTTCACCG TGGGTTGGGC GCAGGCCGAG TCGTTCAAGA CGAACCTGCC GGAATACACG
ATGCAGAGCG AGTATCACGT CGCCGGTTTC CCGGTCGTCG CGAAGGGCCT CGCGGTGCAT
GACGTGTACA CGATGGTCGT GCGGGGCTTC CAGAACGTCA TCGTTTCGCT GTTCTACATT
CTCGCGGTGG GTCTGCTCAG CTTTCACCTC GCGCACGGCG CGGACAGCAT GTTCCAGACG
CTTGGACTCC GGAGCGGCCG CTGGTCCTCC GCGCTGCGCA AGATCGCGCT CGCCTTCGCG
ACGCTCTACT TCCTCGGCAA TCTCGCCATT CCTGGCGCGG TCCTGCTCGG CCGGCTGCAA
GCGCACGCCG ACACACCCGC CACCGCTGCT CTTCACCGCT AA
|
|---|
| Protein sequence | MNLFRSTIGR KIIMAVTGLI LIGFVIGHLV GNLQVFSGPD KINGYAHFLQ SLGPLLWVAR
IGLLVAVGLH IWAATVLTLE NHEARDVAYN VKHTIRATLT SRTMRWTGYI VAAFILYHLA
HFTVGWAQAE SFKTNLPEYT MQSEYHVAGF PVVAKGLAVH DVYTMVVRGF QNVIVSLFYI
LAVGLLSFHL AHGADSMFQT LGLRSGRWSS ALRKIALAFA TLYFLGNLAI PGAVLLGRLQ
AHADTPATAA LHR
|
|---|
| |