Gene Oter_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0624 
Symbol 
ID6206479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp763179 
End bp764117 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content68% 
IMG OID641690247 
Productmembrane-flanked domain-containing protein 
Protein accessionYP_001817514 
Protein GI182412448 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.614646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAC TCCTGCGCGC CCGGTTGCTG TCGCTGCTGC GCGTGCCGCC CGAGCCGGCG 
GCGCCGTGGG GCGCCCCCGG CTCCATTCGT GTCTTTCGAG CCGCGCGCAA CTTCTACCGG
TTGCGGCTAT TTCGTTGGAT CGTCGGGCAG GCCGCGACCG CGACCGGCAT CGTTTTTTCG
CTTTGGTTCC TGTCCGATCT GAAGGCAGGG GTGGATTACT ACAAAAACGA AGCTCCCCCT
CCGGCGGTGC AGCCCGCGGC GCCAGGTGCC GCGAGCCCGG CAACGTCGCA GGTCATCACG
CCGCGCCCCA CCCCTCGCCG GCCGCAACTC AGCCCGAGCG GACTGCCGCG CGAGCTTGAC
CAGCAGGCGC GACAACTCGC CCGCCACACG CCGCGGTGGC TGTTCCCCGC GATCGGGCTG
TTCGAGTTTG GCAGCGTGCT GCTCTATCTC GCGCAGCTGC CCATCACCTA CGGGGTCCTG
CGGCTCGATT TCGAACAGCG CTGGTATATC GTCACCGACC GCAGCCTGCG CATCCGCTCG
GGGCTGATGT CCGTGCAGGA AAGCACGATG AGCTTCGCCA ACGTGCAGCA GGTGACGCTG
ACGCAGGGTC CGCTGCAACG GCTGCTCGGA ATTGCCGACG TGCGCGTGCG TTCAGCGGGC
GGCGGCAGCG GCGACGCGCA TGAAAAAGGG CAGGATGATT CGATGCACGT CGGCGTCTTT
CATGGCGTGG ACAACGCGCT CGCAATCCGC GACCTGATCC TTGAACGGCT GCGATCGTTC
CGCGCCGCGG GGCTGGGCGA CCCGGACGAT CGTCGTGAGG TCACGTCGCC GGTCGTTTCC
GTTCCTCCCC CGGCCGCATC GTCCAGTGAA GAGGTGCTGG CCGCCGCGGC GCTGCTCCTC
GCCGAAGCGC GCGCGCTCCG CCAGACCTGC GAACGCTAG
 
Protein sequence
MLELLRARLL SLLRVPPEPA APWGAPGSIR VFRAARNFYR LRLFRWIVGQ AATATGIVFS 
LWFLSDLKAG VDYYKNEAPP PAVQPAAPGA ASPATSQVIT PRPTPRRPQL SPSGLPRELD
QQARQLARHT PRWLFPAIGL FEFGSVLLYL AQLPITYGVL RLDFEQRWYI VTDRSLRIRS
GLMSVQESTM SFANVQQVTL TQGPLQRLLG IADVRVRSAG GGSGDAHEKG QDDSMHVGVF
HGVDNALAIR DLILERLRSF RAAGLGDPDD RREVTSPVVS VPPPAASSSE EVLAAAALLL
AEARALRQTC ER