Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0624 |
Symbol | |
ID | 6206479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 763179 |
End bp | 764117 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641690247 |
Product | membrane-flanked domain-containing protein |
Protein accession | YP_001817514 |
Protein GI | 182412448 |
COG category | [S] Function unknown |
COG ID | [COG3428] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.614646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAAC TCCTGCGCGC CCGGTTGCTG TCGCTGCTGC GCGTGCCGCC CGAGCCGGCG GCGCCGTGGG GCGCCCCCGG CTCCATTCGT GTCTTTCGAG CCGCGCGCAA CTTCTACCGG TTGCGGCTAT TTCGTTGGAT CGTCGGGCAG GCCGCGACCG CGACCGGCAT CGTTTTTTCG CTTTGGTTCC TGTCCGATCT GAAGGCAGGG GTGGATTACT ACAAAAACGA AGCTCCCCCT CCGGCGGTGC AGCCCGCGGC GCCAGGTGCC GCGAGCCCGG CAACGTCGCA GGTCATCACG CCGCGCCCCA CCCCTCGCCG GCCGCAACTC AGCCCGAGCG GACTGCCGCG CGAGCTTGAC CAGCAGGCGC GACAACTCGC CCGCCACACG CCGCGGTGGC TGTTCCCCGC GATCGGGCTG TTCGAGTTTG GCAGCGTGCT GCTCTATCTC GCGCAGCTGC CCATCACCTA CGGGGTCCTG CGGCTCGATT TCGAACAGCG CTGGTATATC GTCACCGACC GCAGCCTGCG CATCCGCTCG GGGCTGATGT CCGTGCAGGA AAGCACGATG AGCTTCGCCA ACGTGCAGCA GGTGACGCTG ACGCAGGGTC CGCTGCAACG GCTGCTCGGA ATTGCCGACG TGCGCGTGCG TTCAGCGGGC GGCGGCAGCG GCGACGCGCA TGAAAAAGGG CAGGATGATT CGATGCACGT CGGCGTCTTT CATGGCGTGG ACAACGCGCT CGCAATCCGC GACCTGATCC TTGAACGGCT GCGATCGTTC CGCGCCGCGG GGCTGGGCGA CCCGGACGAT CGTCGTGAGG TCACGTCGCC GGTCGTTTCC GTTCCTCCCC CGGCCGCATC GTCCAGTGAA GAGGTGCTGG CCGCCGCGGC GCTGCTCCTC GCCGAAGCGC GCGCGCTCCG CCAGACCTGC GAACGCTAG
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Protein sequence | MLELLRARLL SLLRVPPEPA APWGAPGSIR VFRAARNFYR LRLFRWIVGQ AATATGIVFS LWFLSDLKAG VDYYKNEAPP PAVQPAAPGA ASPATSQVIT PRPTPRRPQL SPSGLPRELD QQARQLARHT PRWLFPAIGL FEFGSVLLYL AQLPITYGVL RLDFEQRWYI VTDRSLRIRS GLMSVQESTM SFANVQQVTL TQGPLQRLLG IADVRVRSAG GGSGDAHEKG QDDSMHVGVF HGVDNALAIR DLILERLRSF RAAGLGDPDD RREVTSPVVS VPPPAASSSE EVLAAAALLL AEARALRQTC ER
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