Gene Oter_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0540 
Symbol 
ID6208763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp642742 
End bp644340 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content63% 
IMG OID641690162 
Producthypothetical protein 
Protein accessionYP_001817430 
Protein GI182412364 
COG category 
COG ID 
TIGRFAM ID[TIGR02677] conserved hypothetical protein TIGR02677 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGG CGGAACCACA GCGAGATGAT TTGGAATGCC CGCCCGGCGG CTACCAGACG 
TTCCATCACT TGGCCGCACC CAAGGTCGAT TTCTATCGCG CGATCCTCCG TGTCTTTGGA
CAGGCGAAGG AACATTTCGA GATTTCGCTT CGTCCCGCTG AGGTAGCCGA TCGGTTGGTG
AACGGTTCTG CGCTCCCCGA TGTCGAAGAA CTGAGCCTGG CCCTCGAACA ACTTCACAAG
TGGGGAAACT TGGACGCGAG CCAGGACAAC TCCGAGGTGC AAACGGTGGA GGAATTCAAA
CGGCCACGAT TCCTGTATCA ATTCACGATG GCAGGCGAGG CGACCGAACA GGCACTCACC
GCGTTCGACC TGCACTTCCT GCGGCCTGGC GAACTACAGA CGACCGCGCT CCGCAGCATT
CAAGAAACGC TTGATGAATT GCAGCGTCTT CTCGCCAACG GGGACCTCGA CACCGCAAAG
GCCGTTCGCG CCCTGCGCGA ACTCGCCGAC CGGTTCCACC AACTTGTAAC CCGCGCACAG
TCTTTCATGC GCACTGTGCA GCGCAGCATC GACGCTCCGT CGTCTGAATT GGACCTGTTT
CTCCAGCACA AGGAGGCGTT GTTGAGCTAT CTTGAACGGT TTGTCGGCGA ACTTGTGCTG
GCCACCTTCC GCGTCAGCAC CAGCCTCCGC CACATCGAGG CCGGTGGCAT CGACCGGGCG
CTCGATGCCG CAGCGGAGGC GGACTTGGTC GATGCCTTGC AGCCTGACGA ACGCCAGCGG
GCCGCGGCGC GCGAACAATG GCAACTCCGC TGGCAGGGAC TGCGCCGATG GTTCCTCGGC
GAATTGGAGG CGCCATCTCA GGCGGAGATT CTACGTGGCC GGGCGCGAGC CGCGATTCCC
GCCTTGTTGG AAACGGTGCG CCGGCTCAAC GACCAGCGGG CCAGTCGCAC TGATCGCGCA
ACCGACTTCA TCACGCTGGC GCGGTGGTTC GCAGCGTGCC CAGCCAACGA CGACCTACAT
CGCCTATGGC GGGCCGCGTT TGGCCTCACG CCGGCGCGCC ACCTTCGCGT GAACGAGGAT
ACGTTAGCTG CATGGGAGAG CGAGGGCGCC AATTCCCGCA CGTCGTGGAC CGAGGCACCG
CCGTTCTACC TGACACCGCG GTTGCGAGCG GTGGGGCGTT CGACTCCGCG CGGCCCGGTG
CGCGCCGTCA TTGATCGTTC CGCAGAGCGC GCGCGCTTGG CGCAACTCGC CACCGAAGAG
GAGGAGCTTG CGGCAGCGGC TCGGCGCACC CTCGCCACAG GACAACCGCG TCGACTGTCT
GCCCTGCCAG TGCTGAAAGA GCGGGAACTC GACCTTTTGC TCGATCTCCT GGGCGAAGCC
AATGCAAGCG TGTCCAAACC GGGCGAATCC GTTGAAGCGA CTTCCGAAGA TGGTTCGTTG
GTGATCGTGC TCGAAACGCC GGCCACGGGC ACGCCGCTGG CTACGGTCGA AACCGAAGTC
GGCACCCTGC GGGGGCCGGA TTTCCTCGTC ACGATCACGG ATCTCAACGC TCCTGCCGCT
ACGGACGTCG TCGGGCAAAC CGTAGCCCTT TCCGCATGA
 
Protein sequence
MNQAEPQRDD LECPPGGYQT FHHLAAPKVD FYRAILRVFG QAKEHFEISL RPAEVADRLV 
NGSALPDVEE LSLALEQLHK WGNLDASQDN SEVQTVEEFK RPRFLYQFTM AGEATEQALT
AFDLHFLRPG ELQTTALRSI QETLDELQRL LANGDLDTAK AVRALRELAD RFHQLVTRAQ
SFMRTVQRSI DAPSSELDLF LQHKEALLSY LERFVGELVL ATFRVSTSLR HIEAGGIDRA
LDAAAEADLV DALQPDERQR AAAREQWQLR WQGLRRWFLG ELEAPSQAEI LRGRARAAIP
ALLETVRRLN DQRASRTDRA TDFITLARWF AACPANDDLH RLWRAAFGLT PARHLRVNED
TLAAWESEGA NSRTSWTEAP PFYLTPRLRA VGRSTPRGPV RAVIDRSAER ARLAQLATEE
EELAAAARRT LATGQPRRLS ALPVLKEREL DLLLDLLGEA NASVSKPGES VEATSEDGSL
VIVLETPATG TPLATVETEV GTLRGPDFLV TITDLNAPAA TDVVGQTVAL SA