| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0458 |
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| Symbol | |
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| ID | 6207528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 536681 |
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| End bp | 539944 |
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| Gene Length | 3264 bp |
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| Protein Length | 1087 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641690080 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001817348 |
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| Protein GI | 182412282 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4641] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.926775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.4684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTCC TGTTCGCGAC AGGTTCGCCG GCCCGCTACA TGGCGCCACC GCTGCTCGGT
GACGAGCAGG TAAACTGCGG ACCGGACTGG ACGAACGAGG AAGTCGACGG CTACTACTTT
TCCTTGGCGA CGCCGGTCGG GGAATACGAT CTCGCCACCG TCGCAGCACA GCTGGATTCC
GATCAACCGA TCGATGCGGT TGTCTGTCTA GTCGATGCCG CGTGGCGGAA TCTGCCGCGA
AATCTCGCGC AGTTTTCGTG CCCCAAGATT CTGCTCGTTG CCGATACTCA CCACCTGCAA
CAGCCCATCA GCAGGATGCT GGAATATGCC ACGAGTGAAC CGTTCGATCG TGTCGTATTC
CTGTACGATC GGCACCACGC GACGTTCTTC GAGCACGCCG GATTGCGGAA CCTGTATTGG
TTTCCGGGGC TGACGTTTCC GCACTCCGAC GCGCTCGTAG CGTCGAGCCG GCAATCAATG
CGGGAGCGGC AGATCGCGTT CGTGGGCCAA GCTGGCGGAT TGCACCCACG GCGCACGCGG
ATGCTCGATG GACTTGTCGA TGGCGGTCTC CCGGTTGCTC GCGCTGTGCT GTCGCAAACC
GAAGGGCTCC AGCACTACGG CCGGTCAAGC ATCGGGCTGA ACGCCAGCCT CAATGGCGAC
CTCAACCTGC GAATTTTCGA GATTCTGTCG AGCGGCGCGC TGCTGCTCAC GGATTGGCTA
AGTCCGGCCG CGGGGCTCGG TCAGGTGTGG GCTGAAGGAC GCGAAATGGC GACCTACCGG
TCGCTTCCTG AGTTGGTTGA ACGGGCCAGG CACTATCTCG GCCACCCCGA GGAGGCGGCG
AGAATCGCGG CCGCAGGGGC GACGTGGTTC GATCAGCATT TCCGCTCGGA CCAGCGACGC
ACCTTGTTCC AGGAACTGGT GTTCAACGGC ACGCCGCCGC CGCTCTTTCC GGGCTTGTGC
CGGACGACAG CAAGTTCAGT TCATTTCAGC CACGGGTTGG TGAGTGCGTA TGAGTGCGTC
CAGGAGATGC ACCGCCAGCG CGAACGTGTG GTCGTCCGCT GCGCGCCCGA TGTACCGGCG
GAAATCTGCA GCCTTTGGAC AACCCTGCCG CGCGTTGAGC CTGCGACGGA TCCTGTGGCA
GCGGTCGACC TCGAGGTGCA ATCGAGCGAT TGTTTTAAGC TGCCGGCCGG AACGACAGCC
TCACGTATTT TAATTTGGGA TATCGCCGGA CAGGTCCCAA AGGGGGTGGC CTCGCAGCTC
GCCGCGCTGA AGCTGGTGCG ATCCGGCGAG GCCGAAGGTT TCTATGTGAG CGGAACGGCG
CGCCGTCCTG CGGCACCGAC GTTGGGCGAA TTGCAGGAGG CTCGGCTCTT GATGGAACGG
GGGCAGATTG CGGCGGCGCT GCCGCTGGCC CAAGCGGCCG TGAGAAAGAA CCCGCGCAGC
GTCGAGGTAC TGGCCGTCCT CGCGGAGTTG GCGTTCGAGG CCGGACATCG TTCTTTTCTG
GAAAAGATCA TCAAGGACGC GCGAGCGATC GCTCCGCTCG ATCCCCGGGT TCGCGCACTG
GACGAGTTCT TGATGCCAGG TCGAGCGACG CGACGCGTGC CCCGACTTCT GGCCACCGGG
TGGGCCTACT TTGGGCTGAA AGAATGGGCG CGCGCTGGAA GCTGTGCGTG CGAGGTTCTG
CGGAGCGATC CGGATCAGGC CGAAGCGCAC CTCCTCCTGG GACGGAGTTT GATGCGATCC
GAGAACATTC GCGATGGGTT GACCTCGTTG CAGCGGGCAA CGGAGCTTGC GCCTTCGGAG
GCGGCGGCTT GGCGGGCGCT GGCGGAAGCG TACGCGCAGA TCGAAGATGC AGCGGCCGCG
CTAGTCGCCG CAGAGCGAGC ACTCGAGCAT GGTCGGGACG TCGACTACCG CTCCCATTTC
CTAGTGGCTT GGGCCGCGCT TACGGTCACA AACCATGAGC GCGCCCGTGC GGTACTTGCT
CAGATACTTC AGGCTCAGCC GGGCAACTTG CGGGCCAAGC GATGGCTCCT GCTGGCTGAG
GGTCAGGCGA ACATCCCCAA GGGGGAAATC TCGCCGTCGG CGAGAATTCC GCCAAGGGCC
GCGCGAGACG CCTACGATCT TTTGGTGTGC GGCCTGGAGG TCAACGAGCA CCACGGCGTG
GGCGTTCTCC TTAAGCGTTT TTTCCCCGCG TCGCACTCCT TCGTCACCCT GCGTTCGCGC
ACGCAGTACA AGGGCGAAGA GTCCTTTGGG GCCATCAACA TGGTCGCGCC ATCGGCTGGG
CTGTCCTTAA ATGCGATTCG CCGCGATCTG AGCCTGCTCC TCGACGGACG CCGGATTCGA
CGAATCCTGT GCGTCCCCTA TTACCTCGCC GATTTCCATC ATGGCTATCT GGCGCGTGAA
CTGACGGGCG CGCCCCTTTG CACCTATGTG ATGGACGACC AGAATGTCTA TACTTCGAAC
GTGCCCGATT CCGCCGCGAA GCGGTTGTTC GAAGCTTCGG ATCTGCGGCT CGCCATCTCG
GAAGAAATGA CGGCGTCCTA CGAGCGGAAG TTTGGGACCA CGTTCCACTT TGCGCCCCCC
GTGCTCACCT CGAACGCGGA CGCCGTCGTC AATGTTTGGG ATAGGAGTAC GGCGCCGGCC
AATCGTGCGG CGATGCTGGG CAATGTTTGG ACCTTCGCTC AGTTCGAGCG CTTGCGGGCC
TTTACTCGCG CCACCGGTCT GACCATCGAC TGGTTTGGAA GCGGTCCCAA AGCGGCATGG
CTGGGCGTCG ACCCGCTCGC ATTGGCGAAT GACGGGATTC ACTGCGCTGG CTTCCTGCCC
GAACGCGATC TCATCCGGCG GATAGCGACG TATCCGTTTG TCGTTATCCC GAGCGGCATG
CTGGATGAAA CGGAGGACAA TGAGTCCTTC TCCCGGCTGA GCTTGCCTTC TCGGATGCTG
TTCGTCCTGA CGAAAACGTG CACACCGATG CTGGTGCTGG GCAGCCCTGA CACTGCGGCC
GGCCGGTTTG TGCTTCGCCA TGGGGTTGGG CTTTGCACGA GCTACCGCCC GGACGAGGCG
CAGCGTGCGA TCAGGCGGAT AACCGAGCCC GATACCCGCC AACGGTTTCT TGCTAACGCC
CGAGCCGTCG CGCCGCGGTA TGTTCTGCCA GATCCCGAGG CTTGGCTCTG GCGTTCTCTC
TCGGGACGTC GAGTGCTGCC AGCTTCTTGG AACGCACCTG TTCCGGATCA AAACACGGCA
GTCAGGATGG CCGGAGCAGT CTGA
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| Protein sequence | MRVLFATGSP ARYMAPPLLG DEQVNCGPDW TNEEVDGYYF SLATPVGEYD LATVAAQLDS
DQPIDAVVCL VDAAWRNLPR NLAQFSCPKI LLVADTHHLQ QPISRMLEYA TSEPFDRVVF
LYDRHHATFF EHAGLRNLYW FPGLTFPHSD ALVASSRQSM RERQIAFVGQ AGGLHPRRTR
MLDGLVDGGL PVARAVLSQT EGLQHYGRSS IGLNASLNGD LNLRIFEILS SGALLLTDWL
SPAAGLGQVW AEGREMATYR SLPELVERAR HYLGHPEEAA RIAAAGATWF DQHFRSDQRR
TLFQELVFNG TPPPLFPGLC RTTASSVHFS HGLVSAYECV QEMHRQRERV VVRCAPDVPA
EICSLWTTLP RVEPATDPVA AVDLEVQSSD CFKLPAGTTA SRILIWDIAG QVPKGVASQL
AALKLVRSGE AEGFYVSGTA RRPAAPTLGE LQEARLLMER GQIAAALPLA QAAVRKNPRS
VEVLAVLAEL AFEAGHRSFL EKIIKDARAI APLDPRVRAL DEFLMPGRAT RRVPRLLATG
WAYFGLKEWA RAGSCACEVL RSDPDQAEAH LLLGRSLMRS ENIRDGLTSL QRATELAPSE
AAAWRALAEA YAQIEDAAAA LVAAERALEH GRDVDYRSHF LVAWAALTVT NHERARAVLA
QILQAQPGNL RAKRWLLLAE GQANIPKGEI SPSARIPPRA ARDAYDLLVC GLEVNEHHGV
GVLLKRFFPA SHSFVTLRSR TQYKGEESFG AINMVAPSAG LSLNAIRRDL SLLLDGRRIR
RILCVPYYLA DFHHGYLARE LTGAPLCTYV MDDQNVYTSN VPDSAAKRLF EASDLRLAIS
EEMTASYERK FGTTFHFAPP VLTSNADAVV NVWDRSTAPA NRAAMLGNVW TFAQFERLRA
FTRATGLTID WFGSGPKAAW LGVDPLALAN DGIHCAGFLP ERDLIRRIAT YPFVVIPSGM
LDETEDNESF SRLSLPSRML FVLTKTCTPM LVLGSPDTAA GRFVLRHGVG LCTSYRPDEA
QRAIRRITEP DTRQRFLANA RAVAPRYVLP DPEAWLWRSL SGRRVLPASW NAPVPDQNTA
VRMAGAV
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