| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0407 |
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| Symbol | |
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| ID | 6207468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 486638 |
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| End bp | 487387 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641690029 |
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| Product | type III secretion system inner membrane R protein |
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| Protein accession | YP_001817297 |
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| Protein GI | 182412231 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.578903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTCG GATTTCTCGT CACCTGGATG ATGGTGTTCC TGCGGACGCT GGGTGTGATC
CTCCAGCTGC CGTTGGTGGC GGGACGGCCG ATTCCGGTGA TGGCGCGGTT GGGCATCTGC
GTGTGCATCG CGTCGCTGCT CGCGGGCGTC GTGCCCGAAT CCAGCGTGCC GGCGACCCTT
TGGGGGCTGC TCGCTGCGAC GGCCGGGGAA ATTCTGGTGG GCCTCGCGCT CGGTTTCATG
GTGCGCCTGG CGTTCGCCGC GGTGGAAATG GCGGGGCGCA TCCTTTCGTC GGAGATTGGC
ATCACGATGG GCGGGGGTAT GGGCGTGCCG GAGCCGGCCA CGGAACCGAT GACCGCGCTC
ATCAGCACCT TCGCGGTCGT GCTCTTTTTC GCGTTCGGCG GCCATCTCAT GATGCTCTCG
GGCCTGGCCC GCAGCTTCGT GCTGGCGCCC GCCGGCCAGC CGATGCTCGC GCCGTCCGCC
AGCGATCTCC TCATCAACGC CACCTCGCAT CTCATCGAAG TCGGGGTGCG AATCGCCGCG
CCGTTCATCG CGATGAACTT TCTCGTACTG CTGACGTTTT CCGTGCTCGG GCGCGTGCTG
CCGAAAATGA ATGTTTTCAT TGTCAGCTTC TCGATGCGGC TGATCGCCGG CTTCACGCTG
CTCGCCTCGG GCGGCACGCT GATCGCGCGC TACCTTTACT TGGAATTCGA CGACACCCCG
GTGCGCATGC TGCAGTTGTT CGCTCGCTGA
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| Protein sequence | MTLGFLVTWM MVFLRTLGVI LQLPLVAGRP IPVMARLGIC VCIASLLAGV VPESSVPATL
WGLLAATAGE ILVGLALGFM VRLAFAAVEM AGRILSSEIG ITMGGGMGVP EPATEPMTAL
ISTFAVVLFF AFGGHLMMLS GLARSFVLAP AGQPMLAPSA SDLLINATSH LIEVGVRIAA
PFIAMNFLVL LTFSVLGRVL PKMNVFIVSF SMRLIAGFTL LASGGTLIAR YLYLEFDDTP
VRMLQLFAR
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