Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0336 |
Symbol | |
ID | 6204199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 402678 |
End bp | 403349 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641689958 |
Product | isochorismatase hydrolase |
Protein accession | YP_001817226 |
Protein GI | 182412160 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.499522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGA TCCTCTCCGC CCTCTTCGCC ACCACGCTCG TGCCGCCCGG CCCCGCCGCC GCCACGCCAA TCGCCCCGCC CACCCTGCTC CAACTCGCCG GCGTGCGGGC CGCGCCCGGT CGTCTCGCCG AAAGCGTGGT GATCCTCATC GATCTCCAAC GCGATTACAC GGCAGCCGGC AAACTGCCGC TCGCCGGCAT CGCGCCTGCT CTGCGCGAGA CCGCGCGATT GCTCGAGCGC GCCCGCGCCG CCGGCGTGCC GATCATTCAC ATCCGGCAGG TCAGCCCGCG CGGCCGCGGC CTGTTCGAGA CCGGCACCCC CGGCGCGGAA TTCGCCTCCG AAGTCACCCC GCTTGCCGGT GAGCACGTGA TCGAGAAACG ACTGCCAAAC GCCTTCGCCG GCACGACGCT CGCCGATACG CTCGCGCAGC TCGGACGGAA GGAGCTGATC CTCGCCGGCG CCATGACTCA CATGTGTGTC AGCGCCACGG CGCGGTCCGC GCTAGATCAC GGCTATCACG CGACCGTGGT GGCCGATGCC TGTGCGACTC GCGATCTGCC GGCGACCGAT GGCGGCGTGA TCGCCGCAGC CGACGTGCAC CGGGTCGCAC TCGCCGAACT CGCCGACCGC TTTGCCACGG TGGTTCACAC GGTCGAGAAT CTTCCGGACT GA
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Protein sequence | MKPILSALFA TTLVPPGPAA ATPIAPPTLL QLAGVRAAPG RLAESVVILI DLQRDYTAAG KLPLAGIAPA LRETARLLER ARAAGVPIIH IRQVSPRGRG LFETGTPGAE FASEVTPLAG EHVIEKRLPN AFAGTTLADT LAQLGRKELI LAGAMTHMCV SATARSALDH GYHATVVADA CATRDLPATD GGVIAAADVH RVALAELADR FATVVHTVEN LPD
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