Gene Oter_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0320 
Symbol 
ID6207180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp376830 
End bp378035 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content68% 
IMG OID641689942 
Producthypothetical protein 
Protein accessionYP_001817210 
Protein GI182412144 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.895075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.234249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGC GGCTCATTCT TCACAGTGTG CGGGCGCTGG CGCGTTATCC ATTGCGCAGC 
GGGTTCATCA TGCTCTCGAG CCTGATCGGC GCCGCGGCGT TGACGTTCGT GCTCTCCGTC
GGCCAGGGCG CGCGCGCGAA GATGCTCAGC ACGGTGCGGC AGATCTTCGG CGACTCTTCG
ATCCTCGTCA TCACCGGCGG TCACCAGCTC ATGGGCGGTC CGCGGCCGGG CGCCGCGCGA
CTGACGCTCG ACGACATCGA CGCGGTCGCG CGGGGCGTTC CGGACGTCGT TGCGTGGGAT
CCCCAGCAGG TGCTCTACGC TTCGGTGCGC CGTGGCGCCG CGGCGAGCAC GGTGCGCGTG
CTGGGAGCGT CGGAGCGCGC GGAGCAAGTC TGGTCGCGCC GCGTGACGCG GGGCGTGCAT
TTCGATGCCG CGGCCGTGAA GCGTTCCGAT CGCGTCGCGC TCGTGGGCGA GACGGTGATT
CGAGATGTAT TTAATAACCA GGACCCGATC GGTGCCGAAA TTCAGATTGA GTCAGCGCCA
TTCACCGTCG TTGGCGTGCT CGAGCGGTTT GGCACCGATC TGCACGGGAT GGATCGCGAC
AACGAGGTGG TGATTCCGAT CACGACGTTC ATGCGCCGGC TCGCCAACGT CGACACGATC
CTTGCCGCCA AGCTGCTGGT GAAGGACGGC ACCCACGTCG CGAGTACGGC GAAAGACGTC
ACGCAGCAGC TGCGCGCACG GCACGGACTC GCGGCCGGCC AGCCCGACGA TTTCAATCTG
CTCACCCCGA TCGAAGTGCA GCGGATGATG GCCATGATGC GGCGTGTCGT GTCGCTCTAC
TTGCCCCTGG CGGCCAGTGT CGTGCTGCTC GTCGGCGGCT TGGTCGCGGC CACGTTGATG
CTCGGTGCGG TGAACGCCCG GGTCGCGGAA ATCGGACTGC GCCGGGCGGT CGGAGCCCAG
CCGCGCGATA TCAGCCGGCA GTTCCTGATC GAGACCACCG TGACGGTGCT CGGTGGGGGC
GTCGCCGGCA TCGTGCTCGG ACTCGTCGTC GGCCAGATCG TGGCGGATCA CCTCAAGCTC
GAGAGTCCCT TCCCGTGGCT CGCGATCGCG CTGGGGCTGC TGCTGTCAAC GGCCACCGGG
CTGCTCGCGG GCGTGCTGCC GGCGCGCCGC GCGGCCCGGC TGCTGCCGGC GGACGCGTTG
CGATGA
 
Protein sequence
MNTRLILHSV RALARYPLRS GFIMLSSLIG AAALTFVLSV GQGARAKMLS TVRQIFGDSS 
ILVITGGHQL MGGPRPGAAR LTLDDIDAVA RGVPDVVAWD PQQVLYASVR RGAAASTVRV
LGASERAEQV WSRRVTRGVH FDAAAVKRSD RVALVGETVI RDVFNNQDPI GAEIQIESAP
FTVVGVLERF GTDLHGMDRD NEVVIPITTF MRRLANVDTI LAAKLLVKDG THVASTAKDV
TQQLRARHGL AAGQPDDFNL LTPIEVQRMM AMMRRVVSLY LPLAASVVLL VGGLVAATLM
LGAVNARVAE IGLRRAVGAQ PRDISRQFLI ETTVTVLGGG VAGIVLGLVV GQIVADHLKL
ESPFPWLAIA LGLLLSTATG LLAGVLPARR AARLLPADAL R