Gene Oter_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0319 
Symbol 
ID6208267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp375616 
End bp376833 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content69% 
IMG OID641689941 
Producthypothetical protein 
Protein accessionYP_001817209 
Protein GI182412143 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.331177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.130232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGC GCCGGCGCTT CTCGTCTTCG TTGCGTCCGC TGGTGACGCA CCGGATGCGC 
GCGTTGCTGG CGCTGTCCGG TGTGGCCGTC GGCGTCGCAG CGGTGATCGT GTCGCGGGCG
ATCGGCGCCG GCGCGGAGCA GCAGATGCGC ACGACGATCG AGCGGACCGG CACGAATCTT
CTCATCATCA AACCGGTGCC GGTGAAGCGC CTGGTGTCGC GTCCGCAGAT CGCCGGGCTC
GCCACCACGC TCGATCTCGA GGATTACGCC GCGTTCGCCC GACTCCCATT GATCGCCGCG
GTGGCGCCGT CGGTGGACCG TGCGATGCGG GCGAAAGTGG GAGCGATCGC CATGCGCACG
ACGGTCCGCG GCACGACGCC GGCTTACCAG TCAATCCGCG GCTATCAGCT CGCGGCCGGC
CGGTTCATCG CGGATGAGGA TGAGCGCGCG GCCCGGCGCG TCGCGGTGCT GGGCGCGCGC
GTCGCAGACG AGTTGGGTCA CGGCGTGTTG CTGCTGGGCG GCGAAATCCG GATCGCGGGC
GTGCCGTTCG AGATCATCGG CGTTCTACGG GCCAAGGGCG CAACCGTCGA CGGCGCCGAT
CAGGATAATC TGATCGTCGT ACCGCTGCGG ACGGCCCTGC GCCGGATGTT CAACACGACG
TGGCTCACGG CGATCTACGT CAGCGTGGCC GTTCCCGAGC AGATGGACGA AGCGGCGACC
GAACTTCAGG CCTTGCTGCG TGATCGTCAT CGGCGCGACG CATCGCAACC CGACGATTTC
GCGATTCAGA ACATGGCGAA AACGCGCGTG CTGCAGCAGG AGCTGATCGC GGCGCTGAGC
CGCTACGCCG GCGGACTCGC GGCCATCGCC CTCGGTGTCG GCGGCAGCGG CATTCTCGGG
TTGATGCTGC TGTCGGTCCG GGAACGCACG AGCGAGATCG GGCTGCGGAT CGCCGTCGGC
GCACAACCGC GCGACATCCT GATCCAGTTC CTGATCGAGT CCGCAGCGCT GGCGGTGGCG
GGCTGGCTCG CGGGCGCGGC GGTGGGCGGA GCTGCGGCGC TCGTGGTCGC ACTCGGCACG
AGCTGGCCGA TGGGCATCCC GACAACGTCG ATCGTGACAT CGCTGGCGAT GGCGGTGAGC
ATCGGGCTTG GCTTCGGCGC GCTGCCTGCC CGCAACGCGG CGCGGATCCC GCCGATCGAA
GCCTTGTTAA CGCGATGA
 
Protein sequence
MKLRRRFSSS LRPLVTHRMR ALLALSGVAV GVAAVIVSRA IGAGAEQQMR TTIERTGTNL 
LIIKPVPVKR LVSRPQIAGL ATTLDLEDYA AFARLPLIAA VAPSVDRAMR AKVGAIAMRT
TVRGTTPAYQ SIRGYQLAAG RFIADEDERA ARRVAVLGAR VADELGHGVL LLGGEIRIAG
VPFEIIGVLR AKGATVDGAD QDNLIVVPLR TALRRMFNTT WLTAIYVSVA VPEQMDEAAT
ELQALLRDRH RRDASQPDDF AIQNMAKTRV LQQELIAALS RYAGGLAAIA LGVGGSGILG
LMLLSVRERT SEIGLRIAVG AQPRDILIQF LIESAALAVA GWLAGAAVGG AAALVVALGT
SWPMGIPTTS IVTSLAMAVS IGLGFGALPA RNAARIPPIE ALLTR