Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0319 |
Symbol | |
ID | 6208267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 375616 |
End bp | 376833 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641689941 |
Product | hypothetical protein |
Protein accession | YP_001817209 |
Protein GI | 182412143 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.331177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.130232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGC GCCGGCGCTT CTCGTCTTCG TTGCGTCCGC TGGTGACGCA CCGGATGCGC GCGTTGCTGG CGCTGTCCGG TGTGGCCGTC GGCGTCGCAG CGGTGATCGT GTCGCGGGCG ATCGGCGCCG GCGCGGAGCA GCAGATGCGC ACGACGATCG AGCGGACCGG CACGAATCTT CTCATCATCA AACCGGTGCC GGTGAAGCGC CTGGTGTCGC GTCCGCAGAT CGCCGGGCTC GCCACCACGC TCGATCTCGA GGATTACGCC GCGTTCGCCC GACTCCCATT GATCGCCGCG GTGGCGCCGT CGGTGGACCG TGCGATGCGG GCGAAAGTGG GAGCGATCGC CATGCGCACG ACGGTCCGCG GCACGACGCC GGCTTACCAG TCAATCCGCG GCTATCAGCT CGCGGCCGGC CGGTTCATCG CGGATGAGGA TGAGCGCGCG GCCCGGCGCG TCGCGGTGCT GGGCGCGCGC GTCGCAGACG AGTTGGGTCA CGGCGTGTTG CTGCTGGGCG GCGAAATCCG GATCGCGGGC GTGCCGTTCG AGATCATCGG CGTTCTACGG GCCAAGGGCG CAACCGTCGA CGGCGCCGAT CAGGATAATC TGATCGTCGT ACCGCTGCGG ACGGCCCTGC GCCGGATGTT CAACACGACG TGGCTCACGG CGATCTACGT CAGCGTGGCC GTTCCCGAGC AGATGGACGA AGCGGCGACC GAACTTCAGG CCTTGCTGCG TGATCGTCAT CGGCGCGACG CATCGCAACC CGACGATTTC GCGATTCAGA ACATGGCGAA AACGCGCGTG CTGCAGCAGG AGCTGATCGC GGCGCTGAGC CGCTACGCCG GCGGACTCGC GGCCATCGCC CTCGGTGTCG GCGGCAGCGG CATTCTCGGG TTGATGCTGC TGTCGGTCCG GGAACGCACG AGCGAGATCG GGCTGCGGAT CGCCGTCGGC GCACAACCGC GCGACATCCT GATCCAGTTC CTGATCGAGT CCGCAGCGCT GGCGGTGGCG GGCTGGCTCG CGGGCGCGGC GGTGGGCGGA GCTGCGGCGC TCGTGGTCGC ACTCGGCACG AGCTGGCCGA TGGGCATCCC GACAACGTCG ATCGTGACAT CGCTGGCGAT GGCGGTGAGC ATCGGGCTTG GCTTCGGCGC GCTGCCTGCC CGCAACGCGG CGCGGATCCC GCCGATCGAA GCCTTGTTAA CGCGATGA
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Protein sequence | MKLRRRFSSS LRPLVTHRMR ALLALSGVAV GVAAVIVSRA IGAGAEQQMR TTIERTGTNL LIIKPVPVKR LVSRPQIAGL ATTLDLEDYA AFARLPLIAA VAPSVDRAMR AKVGAIAMRT TVRGTTPAYQ SIRGYQLAAG RFIADEDERA ARRVAVLGAR VADELGHGVL LLGGEIRIAG VPFEIIGVLR AKGATVDGAD QDNLIVVPLR TALRRMFNTT WLTAIYVSVA VPEQMDEAAT ELQALLRDRH RRDASQPDDF AIQNMAKTRV LQQELIAALS RYAGGLAAIA LGVGGSGILG LMLLSVRERT SEIGLRIAVG AQPRDILIQF LIESAALAVA GWLAGAAVGG AAALVVALGT SWPMGIPTTS IVTSLAMAVS IGLGFGALPA RNAARIPPIE ALLTR
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