| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0269 |
|---|
| Symbol | |
|---|
| ID | 6208571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 298465 |
|---|
| End bp | 300150 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641689891 |
|---|
| Product | putative ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001817159 |
|---|
| Protein GI | 182412093 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGG AAGCACCGAC CATCATCTTC TCCATGCTTG GCGTCTCGAA GAAGATCGAG
CGCAAGGAAA TCCTCCGCGA CGTCTCGCTG TCGTTCTTCT ACGGCGCGAA GATCGGCGTG
CTCGGGCTGA ACGGCTCGGG CAAGTCCTCG CTGCTGCGGA TCCTCGCCGG CCGCGACAAG
GAGATCGAGG GCGCGGTGCA TTTCGAGCCG GGTTATACCA TCGGGCTGCT CGAGCAGGAG
CCGCAGCTCA CCGCCGGTGC GACCGTGCGC GCGTGTGTCG AGGAGGGCGT GAAGCACCTG
ACGGATCTCG CGGCGGCGTA CGATGACACC TGGGATGAAC TCGATGCAGC GCCGGACGAT
GCGGCGAAGG ACGCGATCAT GGCGAAACAG GGCGAACTGC AGGAGAAGAT CGACGCGCTC
AACGCGTGGG ACGTGGCGCC GCAGGTGGAA ATGGCGATGG ACGCGCTGCG CTGTCCGTCG
GGGGAGCAGA TCGTCGACAC GTTGTCGGGC GGCGAGAGGC GGCGGGTGGC GCTGGCACGA
CTGCTGTTGC AGAAACCGTC GATCCTGTTG CTCGACGAAC CCACCAATCA CCTCGATGCC
GAAAGCGTGC AGTGGCTCGA GCAGCACCTG GCCCGCTACG AGGGAACGGT GATCGCGGTG
ACGCACGATC GCTATTTTTT GGACAATGTC GCGCAGTGGA TCCTCGAGCT GTCGTTCGGC
CACGGAATTC CATGGAAGGG CAATTACTCC TCGTGGCTCG AGCAAAAGCA GCGGCGGATG
GCGGTGGAGC AGCGCACGGA GGATCGCCGG CAGAAGGCGA TGGCGCGCGA ACTGGAGTGG
ATCCGCAAAT CGGCCAAGGC GCGGGTGGCG AAATCGCAGG CGCGCATTAG CGCTTATGAG
GCGATGCTCA AGGAAAACGT GGCCGAGAAG GAGCGGGAGT TCGAAATCTT GATCCCGCCC
GGTCCGCGGC TGGGCAATCT CGTGGTTGAG GCGCAGAAAC TCACCAAGAG CTACGGCGAG
AACGTGCTGT TCGAGAACGT GAACTTCGCG CTGCCGCCTG GCGGGATCGT CGGTGTGATC
GGCCCGAACG GCGCCGGCAA GACGACGATG TTCAAGCTCA TCACGGGCGC GGAGCAGCCG
GACGGCGGCA CGCTGCGCGT CGGCGATACG GTGAAGATCG CGCACGTCGA CCAGTCGCGC
GAGTCGCTGC CGGACAAGGC GACGATCTGG GAGGCGATCA GCGGCGGCGA GGAGATCCTG
AAGCTCGCCA ATCGCGAGGT GAACAGCCGC GCGTATTGCG CGCAGTTTGG CTTCACCGGA
GCCGATCAGC AGAAAAAGGT CGGCGTGCTC TCGGGCGGCG AGCGCAACCG CGTGCATCTC
GCGCGGCTGC TGAAGAGCGG CGCGAACCTG ATCCTGCTCG ACGAGCCGAC GAACGACCTG
GACGTGAACT CGATCCGTGC GCTGGAGGAA GGTTTGGAGA ACTTCGCGGG CTGTGCGGTG
GTGGTGTCGC ACGACCGGTG GTTCCTCGAT CGCGTGGCGA CGCACATCCT CGCGTTCGAG
GGCGAGAGTT ACGTGCACTG GTTCAACGGC AACTACTCGA GCTACATCGA GGATCTGCAT
CGCCGAAAGG GGAAGGACGC CGACCAGCCG CACCGGATCA AATACCGGAA GCTGACGCAT
GGATGA
|
|---|
| Protein sequence | MPEEAPTIIF SMLGVSKKIE RKEILRDVSL SFFYGAKIGV LGLNGSGKSS LLRILAGRDK
EIEGAVHFEP GYTIGLLEQE PQLTAGATVR ACVEEGVKHL TDLAAAYDDT WDELDAAPDD
AAKDAIMAKQ GELQEKIDAL NAWDVAPQVE MAMDALRCPS GEQIVDTLSG GERRRVALAR
LLLQKPSILL LDEPTNHLDA ESVQWLEQHL ARYEGTVIAV THDRYFLDNV AQWILELSFG
HGIPWKGNYS SWLEQKQRRM AVEQRTEDRR QKAMARELEW IRKSAKARVA KSQARISAYE
AMLKENVAEK EREFEILIPP GPRLGNLVVE AQKLTKSYGE NVLFENVNFA LPPGGIVGVI
GPNGAGKTTM FKLITGAEQP DGGTLRVGDT VKIAHVDQSR ESLPDKATIW EAISGGEEIL
KLANREVNSR AYCAQFGFTG ADQQKKVGVL SGGERNRVHL ARLLKSGANL ILLDEPTNDL
DVNSIRALEE GLENFAGCAV VVSHDRWFLD RVATHILAFE GESYVHWFNG NYSSYIEDLH
RRKGKDADQP HRIKYRKLTH G
|
|---|
| |