Gene Oter_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0173 
Symbol 
ID6207631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp208725 
End bp211199 
Gene Length2475 bp 
Protein Length824 aa 
Translation table11 
GC content68% 
IMG OID641689794 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_001817064 
Protein GI182411998 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTTC GCAGCGCCAC GCTTTCGCCT CATTCGCTGC CCATCGGTGG CGGCGGCGCG 
CAGGCGGATG ACGAGCACGG CACGCACCGG CTGATTCAGG TCGACCCGAA CTGGCGAATT
GAAACGATCC ACCCGGACGT GCTCGCGATG TTTGCCATCG CCGACCGCAC GATGGCCGAA
TTGGAGGGCA CGGTACTATG GGACGCGTTC CCCGGCTGGA TCGGTACGGC CGCGGAACGG
AAACTGCGGA CCGCGATGCA CCGGCGCACG CCTGACGATT TCGAACTCCA TTATCCTGCT
TCCGGGATGT CGATCGATGT CCGGTTGCGC CCGGCCGATA CGTCTCTCGC CATCCAGCTC
CGCGATACCA CGCCGGCCCG GGCTCCGGGC GAAAGCATGG CGCGCTCCCG CGATCGCGCC
GAGGCGCCGC AGATCACGGA TACCCTCCCG GTTCCGGTCG CCAACCTGGC CTGCGCATTT
GATCGTGCGG GGCGATTGAC CCACGCCAGC GTGGCGCTGC TCGATCGCTG GAAGGTGCGG
TTGCCCGAGG CGAAGGGCCG GACCGTGCTC GAACTCAACT ATCCGCCGGC GCTCGGCGAG
CGATTGCATC GACAGATCCA GCGGGTGATC GCCACAGGTG AGCCGGTCAC CGATCAGGTC
ACCTACCCCG TTCCCGGCGG GCGCACCGAG TCGCACGAAC ACATCTTCAG TCCGCTGCTG
GGCGAGGACG GCACCGTGCA CGGGGTCGCG GGCGCGATCC GGATTGTGGC AGGCCCGCCC
ACCGTCGCAC CCAAACCCGT CGCACCGCGC ATCGACGGCG AAGTGCAACG GGCCAAAGTG
CTGGGCGAAC TCGCCGCCGA CGTTTTCGCC GCCGACCCCG GCCGGCTCCC GCTCACGGCG
CTGTTCGAGC GCATCGGCAC CGCCATCGGC GCGGAATGCC ATTTCCATCA CACCGTCGTC
GAGGGTCGCT CCTGGCTGCG GCTGGAGTGC AGCGCCGGCC TCGAGCCCGA ACTGCTCGGC
GCACTCAACG AGCTGCCTTT TGGACGCGAG CTGCCTGGGT TGGTGGCGCA GCATCGGCGG
CCGATGATCC TGCACGATCT GCAGAAGAAT CCCACGCTCG AGGGCGCGGC GTTGCGTGAC
CTCCAGCTTG ACGCCTGTGC AGGTCACCCG CTGCTCGCCG GTGACCGACT GCTGGGCACC
CTGCTTTTCG GCACGCGCTG GCGGCCACGT TTCACCGAAG ACGAGCTGCA TTTCCTCCAA
TCAGCCGCGG CGCTGGTAGC CGCGCGGTTG TCCGGCGAAA GCGCCGCCGC ACAAGCTGAG
CAAAAAGCGG AGCCCGCCGC ACGGGCCGCC GTGCTGAAAG AGGAGTTCCT CAACGCCGTC
GTACAGGAGT TGCGCGTGCC GCTCGAATCC ACGCTGCTCC AGATCCGCGC CCTCGCGGGG
CAGGCCGGTG TGCCCGAGCA CCTTCGGTTC GAGCTCGAGG CGATCGCGCG CAATCTCACG
ACCGAATCGC GGCTCGTGAA CGACCTGCTC GACCTCACGC GGATCGCGCG CGGCGAGCTT
TCGATCGAGC ACAATTTCGT CAACCTGCAC GCGGTGCTCC GCGACGCCCT CGGCTCCGTG
AAGCCGGAGC TGGCCGAACA CGGCATCGTC CTGGCGATGA ACGTCCCCGA CGTCGCGCCC
CAGGTGCGTG GCGACGCGGT GCGACTACAG CAGGTGTTTT GGAATCTGCT CAAGCGCGCC
ATCCGCTCGA GTCCGCGGGG CGGTATCGTC TCAGTCCGGC TGAGTCTCAC GCCGTCCCTG
CACGCGGCAG TAACGATCAC TGACAGCGGA CACCCGCTGC CACCCGAGCA AACGCAGCGC
GCCCTCGAGC CGTGGTCGCT CGCCGCCACC GAGGCGGACG AAGCGGGCGC CGGCGGGCCG
CGGGGCTTCG GCATGGCGAC GGTGCGCAAG ATCGTCGAGC TGCACTCCGG CCGGATCCAC
GTGGGTCCGC CGAAGACCGA CGGTGGCACG TCGTTCACGG TGGAATTGCC CTTGGCGCCG
GAGACCGGCC GCGCGGGAAA AGAGCCCGAC GCGGCGCGCG GCCGGCCGGC GAAGCGCACG
CCGGCTCACA CGCAGCAGCG AAAAATTCTG CTCGTGGAGG ATCAGCCGGA TACGCGCGAG
GCGCTTCTCG TGCTGCTACG GCAGTGGAAG CACGAGGTGA TTGTCGCGAC CAGCGTGCGC
GAGGCGCGCG GGCTCGCCCG CATGCATCCG TTCGATCTGG TGATCAGCGC GGTGAGTTTG
TCCGATGGCA GCGGCTATGA ATTGATGGCC GGCCTTCGGC TCGATCACGG CCTGAGCGGA
ATCGCGCTCG TCGGCAACGG CACCGAGCAG GATTCCGCGT TGGGGCGTAG CGCAGGCTTC
GCCGCCCGGC TGGCCAAGCC CGTCAGCATC GAAGCGCTGG AGAAAGCGCT CGCCGCGGTG
CTGCCGACGA ATTGA
 
Protein sequence
MPVRSATLSP HSLPIGGGGA QADDEHGTHR LIQVDPNWRI ETIHPDVLAM FAIADRTMAE 
LEGTVLWDAF PGWIGTAAER KLRTAMHRRT PDDFELHYPA SGMSIDVRLR PADTSLAIQL
RDTTPARAPG ESMARSRDRA EAPQITDTLP VPVANLACAF DRAGRLTHAS VALLDRWKVR
LPEAKGRTVL ELNYPPALGE RLHRQIQRVI ATGEPVTDQV TYPVPGGRTE SHEHIFSPLL
GEDGTVHGVA GAIRIVAGPP TVAPKPVAPR IDGEVQRAKV LGELAADVFA ADPGRLPLTA
LFERIGTAIG AECHFHHTVV EGRSWLRLEC SAGLEPELLG ALNELPFGRE LPGLVAQHRR
PMILHDLQKN PTLEGAALRD LQLDACAGHP LLAGDRLLGT LLFGTRWRPR FTEDELHFLQ
SAAALVAARL SGESAAAQAE QKAEPAARAA VLKEEFLNAV VQELRVPLES TLLQIRALAG
QAGVPEHLRF ELEAIARNLT TESRLVNDLL DLTRIARGEL SIEHNFVNLH AVLRDALGSV
KPELAEHGIV LAMNVPDVAP QVRGDAVRLQ QVFWNLLKRA IRSSPRGGIV SVRLSLTPSL
HAAVTITDSG HPLPPEQTQR ALEPWSLAAT EADEAGAGGP RGFGMATVRK IVELHSGRIH
VGPPKTDGGT SFTVELPLAP ETGRAGKEPD AARGRPAKRT PAHTQQRKIL LVEDQPDTRE
ALLVLLRQWK HEVIVATSVR EARGLARMHP FDLVISAVSL SDGSGYELMA GLRLDHGLSG
IALVGNGTEQ DSALGRSAGF AARLAKPVSI EALEKALAAV LPTN