Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0160 |
Symbol | |
ID | 6207980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 191556 |
End bp | 193358 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641689781 |
Product | hypothetical protein |
Protein accession | YP_001817051 |
Protein GI | 182411985 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTTAC GTTTATTCTT CCGCTCCTGG CCGCTGGCCG CGTTTTGCGC ATTGCTCGGC GCTCTCCCGC TTTCCGCCCA GCCGTCAGGC GGGCCTTACG GCCCGATTCA GCAGCGTTAC GAATTGCCTC AGGCAAAGAC GATCTACTAC GTCGCGCCGG ACGGGCAGCC GGCGAACTCC GGACAGTCGC TGGACCAGCC GACCACGCTG GAAGCGGCGA TCGCCAAAGT CGTCACCGGA GACGCGATCA TCCTGCGCGG CGGCACGTAT CGCACGGGCG GGCTGAAGCT GAACCAGGGC ATCACCCTGC AGCCCTACGC CGACGAGCAG CCAGTGCTCA AGGGCACACT CGTGGCGGCG GACTGGGTTG CGCAGCCGAA CGGCCTCTGG CGCACCTCGT GGACCAAGCT CTTCCCGGCG AAGCCCGCCG ATTGGTGGCG GCGCGATCGT CAGGCGCGGG AGACGCCGCT TTACCTGTTC AACAACGACA TGGTTTTTCT CGATGGCGAA CTGCTACACG CGGTCGGCTA CGAGAACCAG GTCGACGAGA AGTCCTACTG CATCGATTAC GAGAACGGAT TGATCTTCAT CGGCACCGAT CCGACGAACC ATCTCGTGGA GATCACCGCG CACGACAGCG CGCTCGTGCG AACGATTGCC GACGTGCACG GCAAGAAGAA CGACCACAAG GGTCCGGCGA TCCGCGGACT CACGTTCACG CAATACGCGT ATCGCGCGCT CGAGGTCGAA GGCACCGAGC CCGACCGGCT GATGGATCCC GCGGACTTCG GCAAGGAGGT CGTCGGCACG ACGCTCGAGC ACGTCACCAT TTCGTTTTGC TCGCGCGTGG CCGGCTATTT CCGCGGCGAC AACTTCGTCG TGCGCCACTG CCTGATTTCC GACAACGGCA CCGAGGGCAT CTACGTCATC GATTCCGCCG ATATTCTCCT CGAGAAAAAC ATCATCCGCC GCACGAACGT GGAGAAGATC TCCGGCTACT ACGCGTCCGC CGTGAAGATT TTCAATCAGT CGTATCGCGC GGTGGTGCGG GACAATCTGA TCATCGACAA TCCCGATGCC AGCGGCGTGT GGTGGGACGT CGGCAACGTG GATGCCCGTT TCCTCAACAA TTGGGTGCAG AATACGAGCG ATGGCTTCTT CTTTGAGATT TCGAAGCGCG CGATCTGCGC CGGCAACGTG TTCGTCGACT GCCCTCGAGG CGTGTGGGTG CTGAACAGTT CCGATGTGCA CGTCTATCAA AACACGTTCT ACAACAGCTT CGCGTCCTTC GTGCGGACCG AGCGGAGTGC GGCGGGCGAT CACTTCGGCT GGCACCCGAG TACCGGGCCG GATGTCGATC AGCGCCACGG CCACATCTTC GTCAACAACC TGCTCGTGGC GGACGAGACG TTCAAAGGTC CTCTGTTGAT GGTGGGCCAA TCGGAAAAGG TCGCGCACCT GAAGGACTCG CCGCTGAGCC AGCTCGACGG CAACGTGTAT GTGCGTCGTG CGGGCGCGGT GCCGCAGCCG TTGATCGCGT GGAATCCGGC TCCGACCGAA AAGGGTTCGA TGGAAGTGAA GACGTTGGAG GACATCCGGA AGATCGACGC GAAGTTCGAG ACTCACGGTC GCGCCTATGC GGATTATCGG GGCTGGCTGT TCCGGGGCGT GGAGCTCGGT CGCTTCGAAC TGCTCGCCAG TTTCCCGGCG GCGAATGTCA CGACGCCGCT GCCGGAAAAC ATCCAGAAGC TGCTGGGCTG GAAAGCGGCG GGCTTCCCCG GCGCCTACGC ACCGCAGCGC TGA
|
Protein sequence | MNLRLFFRSW PLAAFCALLG ALPLSAQPSG GPYGPIQQRY ELPQAKTIYY VAPDGQPANS GQSLDQPTTL EAAIAKVVTG DAIILRGGTY RTGGLKLNQG ITLQPYADEQ PVLKGTLVAA DWVAQPNGLW RTSWTKLFPA KPADWWRRDR QARETPLYLF NNDMVFLDGE LLHAVGYENQ VDEKSYCIDY ENGLIFIGTD PTNHLVEITA HDSALVRTIA DVHGKKNDHK GPAIRGLTFT QYAYRALEVE GTEPDRLMDP ADFGKEVVGT TLEHVTISFC SRVAGYFRGD NFVVRHCLIS DNGTEGIYVI DSADILLEKN IIRRTNVEKI SGYYASAVKI FNQSYRAVVR DNLIIDNPDA SGVWWDVGNV DARFLNNWVQ NTSDGFFFEI SKRAICAGNV FVDCPRGVWV LNSSDVHVYQ NTFYNSFASF VRTERSAAGD HFGWHPSTGP DVDQRHGHIF VNNLLVADET FKGPLLMVGQ SEKVAHLKDS PLSQLDGNVY VRRAGAVPQP LIAWNPAPTE KGSMEVKTLE DIRKIDAKFE THGRAYADYR GWLFRGVELG RFELLASFPA ANVTTPLPEN IQKLLGWKAA GFPGAYAPQR
|
| |