| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0022 |
|---|
| Symbol | |
|---|
| ID | 6204445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 26817 |
|---|
| End bp | 27917 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641689643 |
|---|
| Product | cytidyltransferase-like protein |
|---|
| Protein accession | YP_001816914 |
|---|
| Protein GI | 182411848 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0615] Cytidylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.112935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.136771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCACG TCTTCGTTTC CGGCTGCTAC GACATCCTGC ACGCCGGCCA CCTGCAGTTC
TTCCGCGAGG CCCGGGCGCT GGGCGATCAC CTGACTGTTT CGTTCGCCTC CTCGGAGGTG
CTGTGGCGGC ACAAGCAGCG CCGCAGCTCG CTGCCGGACG ACCACAAGCG TGCGCTGCTC
GAGGGCCTCA AAATGGTCGA CGCCGTCGTG GTTGGACGCG GGATGGAGGA GGGACTGGAT
TTCAAAGACG ACTTCCTGCA GCTGCGCCCG GAGATTCTGG CGGTCACGGA AGACGACAAA
TACACGCCGT TGAAAAAGTC GCTCTGCGCC GAGGTGGGTG CGCGCTACGT GGTGCTGCCG
AAGACGCCGC CGCAGTTCTC GCCGGTCTCG ACGACGCAGA TCGTGCGCTT CATCCGCGCA
CCCGAAGCGG CGCCGCTGCG CGTGGATTTC GCCGGCGGCT GGCTGGACGT GCCGCGGTAT
GCGCGAGACG GCGCTTACGT CGTGAACTGC GCGATCTCGC CGCTGGTGTC GTTGCGCGAC
TGGCCCTACG AGCGCAATGC CGGGCTGGGC GGAAGCGGCG CGTGGGCGAT GCTGAACGGC
CAGGATGGCA TCGCGTCGGA ACTGGGCCTC GGAGTGGGCT GGCAGGATCC GGCAATCGTG
GCGGAGACGG GGCTGTGCGT CTGGCGCAGC GGCCCGCGGC CGAGCCTCGA GATCAAGCTT
GAGGGTGCGT TTCTGCGCGG CCGGATGGCG CTGTATTGGA CCGGTCGGCC ACACGCGACG
CCGGATCTGG CCAACAATCG CCGCGACTAC GAGGCGATCG CGCGCGCCAG CGTCGTCGCT
CGCGAGGCGG TGTGGCGCGG CGACCTTGCG CTGCTGGCGG AAGCTGTGCG GCAGTCGTAT
GCGGTCCAGC GCGCCGAAGG CATGCAACCG CTCCCCGGCA TCGAGGCGCC TGGCCGCACC
CCGCGACCGC TCGCGGCGAA ATACTGCGGC GGCGGGTTTG GCGGCTATGC CGTTTATCTT
TTTGCCGATC CGGCCGAGCG CGACGTCGCC TGCACCGCTG GAGGCTTCCG GCCGATCGAG
CCGTATGTGA AGCTGGGGTG A
|
|---|
| Protein sequence | MIHVFVSGCY DILHAGHLQF FREARALGDH LTVSFASSEV LWRHKQRRSS LPDDHKRALL
EGLKMVDAVV VGRGMEEGLD FKDDFLQLRP EILAVTEDDK YTPLKKSLCA EVGARYVVLP
KTPPQFSPVS TTQIVRFIRA PEAAPLRVDF AGGWLDVPRY ARDGAYVVNC AISPLVSLRD
WPYERNAGLG GSGAWAMLNG QDGIASELGL GVGWQDPAIV AETGLCVWRS GPRPSLEIKL
EGAFLRGRMA LYWTGRPHAT PDLANNRRDY EAIARASVVA REAVWRGDLA LLAEAVRQSY
AVQRAEGMQP LPGIEAPGRT PRPLAAKYCG GGFGGYAVYL FADPAERDVA CTAGGFRPIE
PYVKLG
|
|---|
| |