Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3965 |
Symbol | |
ID | 5381793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | - |
Start bp | 1379987 |
End bp | 1380742 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640836651 |
Product | ABC transporter related |
Protein accession | YP_001372499 |
Protein GI | 153011285 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.27436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGTGA TCGTCCGGCT GGAGCAGCTT TGCGTGCGCT ATGGCCGTGA AATGGCGCTG GAGAATATCG ATCTCGATGT CCGGCGCGGT GAAACGCTGG CGATCATTGG CGAAAGCGGC TCGGGCAAAA GCACGCTGGC ACTGGCGCTG GCCTCGCTCC TGCCGGGCAA TGCTCGCATT TCGGGCAATA TGGAATGGGC AGATGGAAAG CCGCGACCGG GAAGCGATAT AGGCTTCGTG TTTCAGGACC CGGCATCGAG CTTCGATCCG CTGATGACGG TCGGCGCGCA ACTTGTCGAG ACCATTCGCG CCCATGCGAA AATCGACAAA GCAGCAGCGA AAACCAAGGC AGTCAGCCTT TTACAGCGCG TTCACATTCC GCAACCCGAA GCAAGTTTTT CGCGCTATCC GCACCAGTTT TCGGGCGGGC AGAAACAGCG CATCGCAATT GCGCTCGCCA TTGCTGCCGG TCCGCGCCTG CTGATTGCGG ATGAGCCGAC AAGCGCACTC GACACCATTG TGCAGAAGGA GATTGTCTCT CTTCTGCAGG AACTGGTGCG CGCAGACGGA ATGACGCTGA TCTTCATCAC CCATGACATC GCACTGGCAT CGGGACTGGC TGACCGCATC GCGGTTTTCC GGCGAGGTGA ACTAGTGGAG TTTGGACCCG CTCGAACGAT CATTTCAGAC CCACAAACAG ATTACACGAA AGCGCTGATC ACCGCCGTGC CGGTGCTGGA GGCGGCCCAT GGCTGA
|
Protein sequence | MTVIVRLEQL CVRYGREMAL ENIDLDVRRG ETLAIIGESG SGKSTLALAL ASLLPGNARI SGNMEWADGK PRPGSDIGFV FQDPASSFDP LMTVGAQLVE TIRAHAKIDK AAAKTKAVSL LQRVHIPQPE ASFSRYPHQF SGGQKQRIAI ALAIAAGPRL LIADEPTSAL DTIVQKEIVS LLQELVRADG MTLIFITHDI ALASGLADRI AVFRRGELVE FGPARTIISD PQTDYTKALI TAVPVLEAAH G
|
| |