| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3909 |
|---|
| Symbol | |
|---|
| ID | 5381385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 1319601 |
|---|
| End bp | 1320617 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640836594 |
|---|
| Product | putative simple sugar transport system substrate-binding protein |
|---|
| Protein accession | YP_001372443 |
|---|
| Protein GI | 153011229 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.344207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCG CAAGAATCCT TTTCGCATCC GCAGCACTGG CAGGCGTTCT CGCCGCTGGC
AGCGCGATGG CTGACACATC GTCGAAGAAG ATTGCATTCT CCAACAATTA TGCTGGCAAC
TCATGGCGCC AGGCCATGCT GCAAAGCTGG GACAAGATCA CCAAGGAAGC CGTGAAGGCC
GGTGTGGTCG CTGCGGCTGA CCCGTTCACG ACGGCTGAAA ATCAGGCCAC AGAGCAGGCC
GCACAGATCC AGAACATGAT CCTGCAAGGC TATGATGCCA TCGTCATCAA TGCCGCTTCG
CCAACCGCTT TGAACGGTGC AATCAAGGAA GCCTGCGATG CGGGCATCAC GGTCGTTTCC
TTTGACGGCA CCGTCACGGA GCCTTGCGCA TGGCGCATCG CGGTCGATTT CAAGGCAATG
GGCGAAGGCC AGATCGATTA TCTCGCAAAG CGCTTCCCCG ATGGCGGCAA CCTGCTTGAA
ATTCGCGGTC TTGCCGGTGT TTCGGTCGAT GACAATATCC ATGCTGGCAT CGAAGAAGGC
GTGAAGAAGC ATCCGAAATT CAAGATCGTC GGCTCCGTCA ATGGCGACTG GGCGGCGGAC
GTGGCACAGC GTGCCGTCGC TGGCATCCTC CCAAGCCTGC CGAAAATCGA CGCAGTCGTG
ACGCAGGGCG GCGACGGTTA TGGTGCTGCG CAGGCCTTCG CCGCCGCCAA GCGCGAAACG
CCGATCATCA TCATGGGCAA CCGTGAAGAC GAACTGCAGT GGTGGAAGCA ACAGAAGGAC
GCCAATGGCT ACGAAACCAT GTCGGTTTCG ATTGCACCCG GCGTTTCAAC GCTTGCTTTC
TGGGTTGCCC AGCAGATTCT CGACGGCAAG GACGTGAAGA AGGACCTCGT GGTTCCGTTC
CTCAGCGTCA GCCAGGAATC GCTCGACAAG GATCTGGCCA ACACCCAGAA GGGTGGCGTC
GCCAATGTCG AATATTCGCT GGAAGACGCG CAGAAGGTCA TCGACGCGGC CAAGTAA
|
|---|
| Protein sequence | MKLARILFAS AALAGVLAAG SAMADTSSKK IAFSNNYAGN SWRQAMLQSW DKITKEAVKA
GVVAAADPFT TAENQATEQA AQIQNMILQG YDAIVINAAS PTALNGAIKE ACDAGITVVS
FDGTVTEPCA WRIAVDFKAM GEGQIDYLAK RFPDGGNLLE IRGLAGVSVD DNIHAGIEEG
VKKHPKFKIV GSVNGDWAAD VAQRAVAGIL PSLPKIDAVV TQGGDGYGAA QAFAAAKRET
PIIIMGNRED ELQWWKQQKD ANGYETMSVS IAPGVSTLAF WVAQQILDGK DVKKDLVVPF
LSVSQESLDK DLANTQKGGV ANVEYSLEDA QKVIDAAK
|
|---|
| |