Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3704 |
Symbol | |
ID | 5381504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 1091386 |
End bp | 1092210 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640836390 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001372239 |
Protein GI | 153011025 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.222732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCATC GACTGACAGG TATTCTTCTT GTCGCGCCCG CACTGGCGAT CGTCCTATTA CTGTTCATCG TACCGCTTTT CGGAGCGATC ACCGGAGCTT TCAATGTTTC CGGGGAATGG GGAACCGGCA ATTTCACCAA AGCATTCGAA CTTTATTCCA GCGACATCAT CTTCACCTTT GTCATCGTTA CACTGTCGTC CCTGCTGATT GCGTTATTCT CTATCGCCAT CGGCGGTTAC CTGACGCTCG GCTCCAACCC GCGCGCTGTC ACTGTCCTGC GCTGGCTCTA TCGCTGGCCG CTTTTCATCC CCTTCATCGT GGTTGGTCAG ATACTTCGCA CCTTCCTAGC CAAAAACGGG TTGATGAACA GCCTGCTCAT TGAAACTGGG CTCCTAACCC CACTGCAGGC AATGAGCTTT CTCGACTGGC GTGGCATCGT CATTGCATTC GTCTGGAAAC AGACGCCATT CGTCACCTTG CTACTGGCAG GTGCCATGGC ATCCATCGAT CGCAGCACGA TTGAATCCGC TCGCAATCTT GGTGCCGGGC GGCTGCGCAT TCTCATTGAG ATTGTTCTGC CGCAAGTCCG CCAAACGCTG CTCGTGGGGT TGATACTGAG CTTTGTCACC ATGATGTCCG TCTTGTCCGT TCCTTTGATG ATCAACGCCC AATCACCAAC GATGATCACG GCAAACATGG CATTCCGTAT CAATGCTTAT GGGGATTACG GCGTCGCAAA TGCATTGGGT ACGATCTCGC TCCTCATGAC CAGCCTCGTC GCCTGGGTTT ACCTGCGCCA GACCATGAAG GAACACGGCC AATGA
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Protein sequence | MSHRLTGILL VAPALAIVLL LFIVPLFGAI TGAFNVSGEW GTGNFTKAFE LYSSDIIFTF VIVTLSSLLI ALFSIAIGGY LTLGSNPRAV TVLRWLYRWP LFIPFIVVGQ ILRTFLAKNG LMNSLLIETG LLTPLQAMSF LDWRGIVIAF VWKQTPFVTL LLAGAMASID RSTIESARNL GAGRLRILIE IVLPQVRQTL LVGLILSFVT MMSVLSVPLM INAQSPTMIT ANMAFRINAY GDYGVANALG TISLLMTSLV AWVYLRQTMK EHGQ
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