Gene Oant_3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_3704 
Symbol 
ID5381504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp1091386 
End bp1092210 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content54% 
IMG OID640836390 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001372239 
Protein GI153011025 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.222732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCATC GACTGACAGG TATTCTTCTT GTCGCGCCCG CACTGGCGAT CGTCCTATTA 
CTGTTCATCG TACCGCTTTT CGGAGCGATC ACCGGAGCTT TCAATGTTTC CGGGGAATGG
GGAACCGGCA ATTTCACCAA AGCATTCGAA CTTTATTCCA GCGACATCAT CTTCACCTTT
GTCATCGTTA CACTGTCGTC CCTGCTGATT GCGTTATTCT CTATCGCCAT CGGCGGTTAC
CTGACGCTCG GCTCCAACCC GCGCGCTGTC ACTGTCCTGC GCTGGCTCTA TCGCTGGCCG
CTTTTCATCC CCTTCATCGT GGTTGGTCAG ATACTTCGCA CCTTCCTAGC CAAAAACGGG
TTGATGAACA GCCTGCTCAT TGAAACTGGG CTCCTAACCC CACTGCAGGC AATGAGCTTT
CTCGACTGGC GTGGCATCGT CATTGCATTC GTCTGGAAAC AGACGCCATT CGTCACCTTG
CTACTGGCAG GTGCCATGGC ATCCATCGAT CGCAGCACGA TTGAATCCGC TCGCAATCTT
GGTGCCGGGC GGCTGCGCAT TCTCATTGAG ATTGTTCTGC CGCAAGTCCG CCAAACGCTG
CTCGTGGGGT TGATACTGAG CTTTGTCACC ATGATGTCCG TCTTGTCCGT TCCTTTGATG
ATCAACGCCC AATCACCAAC GATGATCACG GCAAACATGG CATTCCGTAT CAATGCTTAT
GGGGATTACG GCGTCGCAAA TGCATTGGGT ACGATCTCGC TCCTCATGAC CAGCCTCGTC
GCCTGGGTTT ACCTGCGCCA GACCATGAAG GAACACGGCC AATGA
 
Protein sequence
MSHRLTGILL VAPALAIVLL LFIVPLFGAI TGAFNVSGEW GTGNFTKAFE LYSSDIIFTF 
VIVTLSSLLI ALFSIAIGGY LTLGSNPRAV TVLRWLYRWP LFIPFIVVGQ ILRTFLAKNG
LMNSLLIETG LLTPLQAMSF LDWRGIVIAF VWKQTPFVTL LLAGAMASID RSTIESARNL
GAGRLRILIE IVLPQVRQTL LVGLILSFVT MMSVLSVPLM INAQSPTMIT ANMAFRINAY
GDYGVANALG TISLLMTSLV AWVYLRQTMK EHGQ