| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3345 |
|---|
| Symbol | |
|---|
| ID | 5382799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | - |
|---|
| Start bp | 678755 |
|---|
| End bp | 679696 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640836027 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_001371880 |
|---|
| Protein GI | 153010666 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.341454 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAGAC TGGTTTCTGC ATTGATGGCT TCGGCTTTTG TACTTGCGGG AGCGGCAAGC
GCTTCGGCGG GCGAAATCGC CGTTATCGTG AAGACCGTGA ATTCGACTTT CTGGCAGAAC
GTTCAGAAGG GTGCCGAAGC TGCGATCAAG GATTCCAAGG ATCACACCAT GACCTTCCAG
GGTCCGGCGG CTGAATCGGC CATCGCCGAT CAGGTGAACA TGGTGGAAAA TGCCGTGAAC
CGCAAAGTGG ATGCAATCCT TCTTGCCCCG TCCGATCCGG ATGCGCTGAC GCCTGCCGTG
AAGAAGGCGT GGGAAGCCCG AATTCCGGTC GTCATCATCG ACTCGCAGCT CGCCGATGGC
AGCGACAAAT ACTACCGGTC GTTCCTCGCC ACCGATAACC GCAAGGCCGG CGAAGCCGCA
GCCAAGGCCT TGATCGACAA GGCAGGCACG ACCGGCAAGA TCGCCGTCAT GTCCTATGTT
GCGGGCGCTG GCTCGGAAAT CGGTCGCGTC GGTGGCTTCG TGGATTACAT CAAGGCCAAT
TCCAAGCTGG AAGTCGTCGG CCCTTACTAT TCGCAATCGC AGATGGCGAC GGCGCTCAAC
CAGACCACCG ACGTTCTGGC GGCCAATGGC GACCTCGTCG GCATCTTCGG TGCCAATGAA
CCGACCGCCA TCGGCATGGG CCGCGCGATC AAGCAGGCAG GCAAGTCCGG CAAGCTGACT
GCCATCGGCT TCGACGGCAA TCAGGACCTT CAGGAATTCG TCAAGGATGG CACGCTCAAC
GCCATCGTCG TTCAGGGTTC CTACCAGATG GGCGAAAAGG GCATCGAAAC CCTGTTAAAG
GTGCTGAACA AGGAAAAGGT CGAGAAGGTT GTCGATACGG GCGCCGTCGT CGTCACCAAG
GACAATATCG ACCAGCCGGA AGCCAAGAAC GTGCTCTACT AA
|
|---|
| Protein sequence | MRRLVSALMA SAFVLAGAAS ASAGEIAVIV KTVNSTFWQN VQKGAEAAIK DSKDHTMTFQ
GPAAESAIAD QVNMVENAVN RKVDAILLAP SDPDALTPAV KKAWEARIPV VIIDSQLADG
SDKYYRSFLA TDNRKAGEAA AKALIDKAGT TGKIAVMSYV AGAGSEIGRV GGFVDYIKAN
SKLEVVGPYY SQSQMATALN QTTDVLAANG DLVGIFGANE PTAIGMGRAI KQAGKSGKLT
AIGFDGNQDL QEFVKDGTLN AIVVQGSYQM GEKGIETLLK VLNKEKVEKV VDTGAVVVTK
DNIDQPEAKN VLY
|
|---|
| |