| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_1769 |
|---|
| Symbol | |
|---|
| ID | 5378600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 1861457 |
|---|
| End bp | 1865293 |
|---|
| Gene Length | 3837 bp |
|---|
| Protein Length | 1278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640834430 |
|---|
| Product | AsmA family protein |
|---|
| Protein accession | YP_001370314 |
|---|
| Protein GI | 153009099 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGCCGCA TATTCGTCAT CGTCGGCGGG CTTTTCGTGC TGCTGTTGAC GGCAGCACTT
GTCGTGCCGC CTTTTGTTGA CTGGAGCGGC TATCGTGCCG ATTTCGAGCG CGAGGCCAGC
CGTGTTTTGG GGCGCCCTGT CAAGGTCGCT GGTGACGTCA GCGCACGGCT TTTGCCGTTT
CCTTCCGTCG CGTTCTCTGA TGTGCGTGTT GGGCCTGATG CAGCTCATCC GGTGATGACC
GTCGATACGT TTTCGATGGA CGCCGAGCTG ATGCCGTTTC TGCGCGGCCA GCTTCTGATT
TTCGATATGC GTGTGGATCG TCCACAGGTT ACAATTTCTC TCGACAAAAG CGGCAAGGTT
GATTGGGCAA TCCGCCCGTC GACGCCGCTC GATCCGACGA AAATCAGGCT GGAACGGCTT
TCCGTCAGTG ACGGAACAAT TACCCTTCGC GAAGAGGCAA GCGGTCGCAG TCATACAGCT
ACCGAACTTG ATGCTGTGAT CTCCGCAAAC AGTCTTGCAG GTCCATGGCA GGCAAACGGA
AGTCTCGTTC TTCAGGGCGA AAAGCTGGCA ATCGACCTAA CGAGTGGCGA GGCAAAGCCG
GACGGGTCGC TGCGCGTTCG CGCACGTATT TCGCCAAAAG CAATCCCGGC TACTTTCGAG
ACCGATGGCG ATGTGACCGT GACTGAAGGT CGGCTCGACT ATGCCGGTGA CTTTTCGCTC
CGCTCTTCCG ATATGGTTGC CAAGACGACT AAGGATCAGA AAACGCCGAC GGAAACACCC
TTCTTCAGTG GTGTGCGCGT AACCGGTCAA TTCAAGGCGG ATCGCAATCG CTTCGATGCC
AGCGAATTTC GGATGGAGCA GGGGCCTGCC GACAATCCTT ATGTGGTGAA TGGCAAGGCA
TTCATCGATT ATGGCGACAA GCCGCGTTTC GAGGTCAGCG CCGATGGGCA GCAGCTTTTC
TGGGGGCCGA ATGAAGCCGC CAGTGAAGAA CAATCCGGTT CCGTAATGCC GGTGGCTGAT
CGTATTGCGA TAGCGCGTCG TGTTCTCGAA CAACTGCCCA TTCCGACTAT ACCCGGCAAT
GTGGATTTGC GTCTGCCTGC CGTCATTGCA GGTGGTACAA CGATACGCTC AGTCACAGTG
AGCGCGGAGC CTGACGGAAA GAACTGGAAT ATTCGTCAGT TCGCTGCTGA TCTTCCGGGG
CGAACCAAGG TGGAAGCCAA GGGCACGCTC TCGGTTGGCA AGGATTTTGG CTTTAAGGGT
GATATGCTTG TTGCGTCGCG TCAGCCGTCC GGTCTCGCAA GCTGGCTGAA CGAGACAGTT
GACGATTCTG TGCGCAAACT CGAAGGCGCG GGTTTTTCAG GACAGGTCGA TCTTCGCGAC
GGAATGCAGC GGATCGATAA TCTCGAAATT GCGTTGGGAA AAACCACACT CAAAGGCTCG
TTTGTTCGCG AAGTGAAAGG GTTGGCACAG CCTTCAATTA CGCTGACGCT CAATGGCGGA
GCGGTGGAAA GCGAAGCGCT GCAAGCTTTT ACGGCCTTTT TCTCCAGTGG TGACGGGCTG
GGTTTTCTCG ATGGCCAATC GCTGAACCTG GCATTCAAGG CAGGGCCTGT CCGCTATCAG
GACATGGAAG CGGCCAATGT CGACATGGCG CTCCGGCTGC ATGACGGGCG CTTCGATTTC
GACCGGCTGC TGGTTGGCGA TGTAGCGGGC ACGACGCTTA CTGCAACAGG CACCTACGAA
CCCTTCTCCA ATACGCCTTC CGGCTCGCTC GATGCGACGA TACTGTCTGG AGATCTTTCG
CGTTTCCTCT CGCTGATGGC CAACCGCTAT CCCCAGCTAC CGCTGTTTCA TGCGCTTTCG
TTGCGTGCGG CGAATTTCCC TGGGCTGTTC GAGGATAGCG AGATCAATGT CATCGCCAAT
GCGGTGGCGC CGTCCGTGCC TGTGGCGAAC AAGACACCTG CTAAAGGCGC GGCATCCAAG
GGTAAGAGTG CCCGGCCTGC TGAGGCAAAC ACCAAAAGTG CTCCCGGTGT CGGGGAGTTT
TCGTTCAGTG TTACCGGGAA AACAGGCGGC ATGAAGCTGG ACCTGTCGGG CACGGCGAGC
GGTGGCGAGG GTGAGGGCGA GCCGTTGCAG ATGCAATTGA ACGGCACGGC AACATCAGAG
CAAGGCGAGG CGGTACTCGC ATTGATCGGC TTGCCTGCCT TGCCGCTTGG GCTTGCTGGT
GAACTTACCG CCGACCTGAG CATGCAGGGT GCGCCGAGTG CAGGCATGCG GACATTGCTC
AAGCTCACGG CACCAGACGG CTTGGCGACT GCAGACGGTG TGATTTCGCT TGTCGGCGGG
GATATCGCTG CCAGCGGCAA AGCCCAGTTG AAGTCTGCGG ACCTGCAGCC TTTCATCGCA
ACGGCTGGTT TCGCGCTGCC CGGATTTGGT GAAGGGCTTT CAGCAGACCT TGCCAGCGAT
TTTCAGTTCG CAAAGGGTAT CTTGCGGTTT CCCAATCTGA CAGGAAAGCT GGATGGAGAA
GATGTTTCCG CGCGGCTGGA GGCCAATTTT GCCGATAGCG GCCTGCCGCA GTTGAAGGGT
GAGGCAAAGC TCGCGACGCT CGAGGTTGAT AGTCTTGCTG CTATCATGCT TGGGCAGGAT
GCATTTGAGC CGGCCAAGCC CACCACGAAG ACAATCTGGC CGCGTGGTGC ATTCGCGGTC
CGTCCGTCCC TGCCGTTATT GCTGGATATG AAGCTCAACG TGGCGCAAGC TCATATGGAA
GGGTTCGGGA CCGCTACGGA GTTTTCAACG CGGCTTCTGA AGACCATGGA TAGTCTTCAG
TTGAACGAAT TGACCGGCAA CTGGGCAGGT GGATATCTGG TTGGAAACGT TTCTCTGAGC
AATAGCGACA AGAATGCACT CCTCTCGACA GAGCTCAAAT GGAGTGGCGC AAAGCTCAAG
GATTTTTACC AGCTAGAGAA CGGTTCTGCA CCGCTGGGCG GTGTGGTGAA AGCTGCCGTC
AATCTGAATG GTAGCGGCGA GAGCGTTGCG GCGCTGGTCG GATCGCTGGC GGGAGCGGCA
AGTTTTGACG TGGAGAATTT CACCGTCGAC GGTCTGGATG GGGCGGCATT GCCTGCAATG
ATAGCGGCGG CCGATGCAAC GGGCGATCAG TTCTCCGGTT CCGACAAGCT TGCTTCCAAG
CAATTTGTCG GCATTGCCGA CAAGGCAACC GGGCAGGGCA CATTTGCGCC AGGCAACGCG
CGGTTTGACT TTACGATCAG CGGCGGTGTC GCACGTATGG CTGCGGCAAA TCTGAGCGAT
GGAAATGCTG CTCTTCTCAG CGATCTGCAA TTCGACCTGT CGACACTAGG AATTGGCGGA
AACGGTACTT TGACGTTCCA GAACGGGGAT GGCGCCGATA CAGGTATTTC TCCGCAGGTG
GCCTTTTCTC TCGGCGGTAG TTATAGCGCG CCGGAGGTGT CATTCGACAG GCAGCCGCTT
GTTCAGTTCC TGACCCAGCG TGCGCTTGAA CGCGAACAGG AACGTGTTGA ATCCATGCAG
GCGAGTTTGA TGGAGAAGCA GCGCCTCCGT CGTCAGCTTG GGCTGTTCGA AGCAGATGAA
GTGGAACGTG ATCGTTCGCA GCGTGAGGAC GAGGCGAGAC GCCGTGCCGA AGCCAGTGCG
CGCGAAGCGG CTCGGAAAAC CGCCGCGGAA GCTCAACGGC TTGAGGCTGA GAAGCCGCAA
GGCGGACCGG CAGGTGGATC GAAAGATCCT CTGGCATCGC CGGAAGGTGG TCAATCCCTC
AACGAATTCC TGAAAAGTCT GGAAACGACG CCTGTGGTGC CTGTACCTCA GCCTTGA
|
|---|
| Protein sequence | MGRIFVIVGG LFVLLLTAAL VVPPFVDWSG YRADFEREAS RVLGRPVKVA GDVSARLLPF
PSVAFSDVRV GPDAAHPVMT VDTFSMDAEL MPFLRGQLLI FDMRVDRPQV TISLDKSGKV
DWAIRPSTPL DPTKIRLERL SVSDGTITLR EEASGRSHTA TELDAVISAN SLAGPWQANG
SLVLQGEKLA IDLTSGEAKP DGSLRVRARI SPKAIPATFE TDGDVTVTEG RLDYAGDFSL
RSSDMVAKTT KDQKTPTETP FFSGVRVTGQ FKADRNRFDA SEFRMEQGPA DNPYVVNGKA
FIDYGDKPRF EVSADGQQLF WGPNEAASEE QSGSVMPVAD RIAIARRVLE QLPIPTIPGN
VDLRLPAVIA GGTTIRSVTV SAEPDGKNWN IRQFAADLPG RTKVEAKGTL SVGKDFGFKG
DMLVASRQPS GLASWLNETV DDSVRKLEGA GFSGQVDLRD GMQRIDNLEI ALGKTTLKGS
FVREVKGLAQ PSITLTLNGG AVESEALQAF TAFFSSGDGL GFLDGQSLNL AFKAGPVRYQ
DMEAANVDMA LRLHDGRFDF DRLLVGDVAG TTLTATGTYE PFSNTPSGSL DATILSGDLS
RFLSLMANRY PQLPLFHALS LRAANFPGLF EDSEINVIAN AVAPSVPVAN KTPAKGAASK
GKSARPAEAN TKSAPGVGEF SFSVTGKTGG MKLDLSGTAS GGEGEGEPLQ MQLNGTATSE
QGEAVLALIG LPALPLGLAG ELTADLSMQG APSAGMRTLL KLTAPDGLAT ADGVISLVGG
DIAASGKAQL KSADLQPFIA TAGFALPGFG EGLSADLASD FQFAKGILRF PNLTGKLDGE
DVSARLEANF ADSGLPQLKG EAKLATLEVD SLAAIMLGQD AFEPAKPTTK TIWPRGAFAV
RPSLPLLLDM KLNVAQAHME GFGTATEFST RLLKTMDSLQ LNELTGNWAG GYLVGNVSLS
NSDKNALLST ELKWSGAKLK DFYQLENGSA PLGGVVKAAV NLNGSGESVA ALVGSLAGAA
SFDVENFTVD GLDGAALPAM IAAADATGDQ FSGSDKLASK QFVGIADKAT GQGTFAPGNA
RFDFTISGGV ARMAAANLSD GNAALLSDLQ FDLSTLGIGG NGTLTFQNGD GADTGISPQV
AFSLGGSYSA PEVSFDRQPL VQFLTQRALE REQERVESMQ ASLMEKQRLR RQLGLFEADE
VERDRSQRED EARRRAEASA REAARKTAAE AQRLEAEKPQ GGPAGGSKDP LASPEGGQSL
NEFLKSLETT PVVPVPQP
|
|---|
| |